RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RNF40O75150 1001 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SOAT2O75908 522 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 PIGRP01833 764 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 DRD1P21728 446 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SCP2P22307 547 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 DDX6P26196 483 aaKnown RBP eCLIP8.88□□□□□ -0.99
USP39-216ENST00000490193 CDC25AP30304 524 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 PRPHP41219 470 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 TNFSF9P41273 254 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SMTNP53814 917 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 NCKAP1LP55160 1127 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 AMPD2Q01433 879 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SPAG1Q07617 926 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 ELF2Q15723 593 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 ENOX2Q16206 610 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 KRT79Q5XKE5 535 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 PSAPL1Q6NUJ1 521 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 UNQ6494/PRO21346Q6UXR6 183 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SYT13Q7L8C5 426 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 TMEM150AQ86TG1 271 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 CD302Q8IX05 232 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 OR10T2Q8NGX3 314 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SPPL2BQ8TCT7 592 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 C2orf15Q8WU43 125 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 LPIN3Q9BQK8 851 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 LLPHQ9BRT6 129 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 EDEM2Q9BV94 578 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 CCSER1Q9C0I3 900 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 ZCWPW1Q9H0M4 648 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 SMOC1Q9H4F8 434 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 KCND2Q9NZV8 630 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 TBX20Q9UMR3 447 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 NOL7Q9UMY1 257 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 TNRC6BQ9UPQ9 1833 aaKnown RBP8.88□□□□□ -0.99
USP39-216ENST00000490193 ANAPC1Q9H1A4 1944 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 PLXND1Q9Y4D7 1925 aa8.88□□□□□ -0.99
USP39-216ENST00000490193 THADAQ6YHU6 1953 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 LNP1A1A4G5 178 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 PP2D1A8MPX8 630 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 C1QTNF9BB2RNN3 333 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 PIRO00625 290 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 PPEF2O14830 753 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 OGTO15294 1046 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 RHOBTB1O94844 696 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 EGFP01133 1207 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 F11P03951 625 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 C1QTNF9P0C862 333 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 HMGA1P17096 107 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 CSRP1P21291 193 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 U2AF2P26368 475 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP39-216ENST00000490193 TOB1P50616 345 aaPredicted RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 NOVA1P51513 510 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 GUCY2FP51841 1108 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 NBR1Q14596 966 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 PDGFRLQ15198 375 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 MGAT5BQ3V5L5 792 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 SLC39A12Q504Y0 691 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 C9orf57Q5W0N0 161 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 TCEAL6Q6IPX3 200 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 Q6ZNB5 142 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 NYAP1Q6ZVC0 841 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 SYT2Q8N9I0 419 aaPredicted RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 USP13Q92995 863 aaPredicted RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 TCEAL3Q969E4 200 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 SEPT5Q99719 369 aaPredicted RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 SMG9Q9H0W8 520 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 EBF3Q9H4W6 596 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 FBRSL1Q9HCM7 1045 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 TDP1Q9NUW8 608 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 LARSQ9P2J5 1176 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 DSEQ9UL01 958 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 CCL26Q9Y258 94 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 DERAQ9Y315 318 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 DMXL2Q8TDJ6 3036 aa8.87□□□□□ -0.99
USP39-216ENST00000490193 FASNP49327 2511 aaKnown RBP8.87□□□□□ -0.99
USP39-216ENST00000490193 DSPP15924 2871 aaKnown RBP8.86□□□□□ -0.99
USP39-216ENST00000490193 A0A0B4J269 797 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 APBB3O95704 486 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 CAVIN2O95810 425 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 HAPLN1P10915 354 aaPredicted RBP8.86□□□□□ -0.99
USP39-216ENST00000490193 CEACAM1P13688 526 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 AVPR1AP37288 418 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 MATR3P43243 847 aaKnown RBP eCLIP8.86□□□□□ -0.99
USP39-216ENST00000490193 GALK1P51570 392 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 NEK4P51957 841 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 SLC12A3P55017 1021 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 NLRP12P59046 1061 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 ZNF252P-AS1Q0IIN9 211 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 BFSP1Q12934 665 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 IL17AQ16552 155 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 DAB2IPQ5VWQ8 1189 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 PMS2CLQ68D20 193 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 TRIM68Q6AZZ1 485 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 JADE1Q6IE81 842 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 MON1AQ86VX9 555 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms