RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 MCM6Q14566 821 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 CSRP2Q16527 193 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 NFE2Q16621 373 aaPredicted RBP11.53□□□□□ -0.56
UBP1-211ENST00000490112 STXBP5Q5T5C0 1151 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 LARP1BQ659C4 914 aaKnown RBP11.53□□□□□ -0.56
UBP1-211ENST00000490112 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 CMTM8Q8IZV2 173 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 DDX1Q92499 740 aaKnown RBP11.53□□□□□ -0.56
UBP1-211ENST00000490112 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 KIF9Q9HAQ2 790 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 SEMA4GQ9NTN9 838 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 BLOC1S4Q9NUP1 217 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 GTSE1Q9NYZ3 720 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 EXOC7Q9UPT5 735 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 NCANO14594 1321 aa11.53□□□□□ -0.56
UBP1-211ENST00000490112 CCDC163A0A0D9SF12 145 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 KPNA7A9QM74 516 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 CHURC1-FNTBB4DL54 471 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 K7ESF4 209 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 SLC30A4O14863 429 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 HAPLN1P10915 354 aaPredicted RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 SOX9P48436 509 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 FNTBP49356 437 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBP1-211ENST00000490112 KARSQ15046 597 aaKnown RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 PON2Q15165 354 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 LPAL2Q16609 132 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 C8orf34Q49A92 452 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 CEP68Q76N32 757 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 ZNF720Q7Z2F6 126 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 WDR5BQ86VZ2 330 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 CACTINQ8WUQ7 758 aaKnown RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 POMGNT1Q8WZA1 660 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 LOXL4Q96JB6 756 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 TMEM209Q96SK2 561 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 FIZ1Q96SL8 496 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 LPIN3Q9BQK8 851 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 PYM1Q9BRP8 204 aaKnown RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 UXTQ9UBK9 157 aaPredicted RBP11.52□□□□□ -0.57
UBP1-211ENST00000490112 CCDC39Q9UFE4 941 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 PCDHB5Q9Y5E4 795 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 EPG5Q9HCE0 2579 aa11.52□□□□□ -0.57
UBP1-211ENST00000490112 ANKRD63C9JTQ0 380 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 SOAT2O75908 522 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 LDHAP00338 332 aaKnown RBP11.51□□□□□ -0.57
UBP1-211ENST00000490112 CSH1P0DML2 217 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 CSH2P0DML3 217 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 GAP43P17677 238 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 ATF6P18850 670 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TXLNAP40222 546 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 PRSS12P56730 875 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 BFSP1Q12934 665 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
UBP1-211ENST00000490112 TXNDC11Q6PKC3 985 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 PRR23CQ6ZRP0 262 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TMEM86AQ8N2M4 240 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TMEM130Q8N3G9 435 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TTC9BQ8N6N2 239 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 SPATA18Q8TC71 538 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 MRPS31Q92665 395 aaKnown RBP11.51□□□□□ -0.57
UBP1-211ENST00000490112 ZFYVE19Q96K21 471 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 SLC46A2Q9BY10 475 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 ABCB6Q9NP58 842 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 GKN1Q9NS71 199 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 RBM12Q9NTZ6 932 aaKnown RBP11.51□□□□□ -0.57
UBP1-211ENST00000490112 TDP1Q9NUW8 608 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
UBP1-211ENST00000490112 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TSC2P49815 1807 aa11.51□□□□□ -0.57
UBP1-211ENST00000490112 TCHHQ07283 1943 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 LAMA1P25391 3075 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 HUS1O60921 280 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 AKAP3O75969 853 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 PRAMEF12O95522 483 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 PDCP20941 246 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 DRD1P21728 446 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 NLRP12P59046 1061 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 RPL10AP62906 217 aaKnown RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 CYP4F8P98187 520 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 MYL7Q01449 175 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 ALCAMQ13740 583 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 RUNX3Q13761 415 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 ZNF268Q14587 947 aaPredicted RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 PDGFRLQ15198 375 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 FBXO43Q4G163 708 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
UBP1-211ENST00000490112 TMEM196Q5HYL7 178 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 Q6ZS52 159 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 SV2BQ7L1I2 683 aa11.5□□□□□ -0.57
UBP1-211ENST00000490112 CACNA2D4Q7Z3S7 1137 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms