RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
EPHB4-207ENST00000489808 ATF6P18850 670 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 BMP6P22004 513 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
EPHB4-207ENST00000489808 PPP3CAQ08209 521 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 MORC3Q14149 939 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 ZNF699Q32M78 642 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 ZNF667Q5HYK9 610 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 MTSS1LQ765P7 747 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 ZC3H3Q8IXZ2 948 aaKnown RBP20.46■□□□□ 0.87
EPHB4-207ENST00000489808 OR6B3Q8NGW1 331 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 FAM200AQ8TCP9 573 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 GIPC2Q8TF65 315 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 LPIN3Q9BQK8 851 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 SYT15Q9BQS2 421 aa20.46■□□□□ 0.87
EPHB4-207ENST00000489808 TECTAO75443 2155 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 NARSO43776 548 aaKnown RBP20.45■□□□□ 0.86
EPHB4-207ENST00000489808 TRIM49P0CI25 452 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 TRIM49CP0CI26 452 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
EPHB4-207ENST00000489808 GJA1P17302 382 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 COL9A1P20849 921 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 CCNE1P24864 410 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 CYP2F1P24903 491 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 PPP1R2P41236 205 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 GCLMP48507 274 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 LRRC63Q05C16 580 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 STIM1Q13586 685 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 VEPH1Q14D04 833 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 CCDC142Q17RM4 750 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 CFAP221Q4G0U5 840 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 SPATA2LQ8IUW3 424 aaPredicted RBP20.45■□□□□ 0.86
EPHB4-207ENST00000489808 SHKBP1Q8TBC3 707 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 TAF4BQ92750 862 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 ELMO3Q96BJ8 720 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 ZSWIM3Q96MP5 696 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 ZNF334Q9HCZ1 680 aaPredicted RBP20.45■□□□□ 0.86
EPHB4-207ENST00000489808 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 NME7Q9Y5B8 376 aa20.45■□□□□ 0.86
EPHB4-207ENST00000489808 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 PPP1R3GB7ZBB8 358 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 PSMA7O14818 248 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 HLA-DRAP01903 254 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 GTF2H1P32780 548 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 CDH8P55286 799 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 PSMC1P62191 440 aaKnown RBP20.44■□□□□ 0.86
EPHB4-207ENST00000489808 TEAD2Q15562 447 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 MAPRE1Q15691 268 aaKnown RBP20.44■□□□□ 0.86
EPHB4-207ENST00000489808 GAREM2Q75VX8 874 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 MYCBPAPQ8TBZ2 947 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 FUBP3Q96I24 572 aaKnown RBP eCLIP20.44■□□□□ 0.86
EPHB4-207ENST00000489808 GPR88Q9GZN0 384 aa20.44■□□□□ 0.86
EPHB4-207ENST00000489808 MAGEC2Q9UBF1 373 aaPredicted RBP20.44■□□□□ 0.86
EPHB4-207ENST00000489808 A0A1W2PRU2 124 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 TRIM49BA6NDI0 452 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 BIN1O00499 593 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 FGF19O95750 216 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 ASS1P00966 412 aaKnown RBP20.43■□□□□ 0.86
EPHB4-207ENST00000489808 SRFP11831 508 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
EPHB4-207ENST00000489808 MAGEA11P43364 429 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 GPR15P49685 360 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
EPHB4-207ENST00000489808 TAF12Q16514 161 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 CAMK4Q16566 473 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 DDR2Q16832 855 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 FAM78AQ5JUQ0 283 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 TANGO2Q6ICL3 276 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 C4orf50Q6ZRC1 276 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 GPR152Q8TDT2 470 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 SMYD3Q9H7B4 428 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 TMEM8AQ9HCN3 771 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 KIAA1468Q9P260 1216 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 WNT16Q9UBV4 365 aa20.43■□□□□ 0.86
EPHB4-207ENST00000489808 DOCK8Q8NF50 2099 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 A8MXQ7 604 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 SLC16A3O15427 465 aaKnown RBP20.42■□□□□ 0.86
EPHB4-207ENST00000489808 ECI2O75521 394 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 P4HA1P13674 534 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 HMGA1P17096 107 aaKnown RBP20.42■□□□□ 0.86
EPHB4-207ENST00000489808 GABRR2P28476 465 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 PIK3CAP42336 1068 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 GPC5P78333 572 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 SDHAF4Q5VUM1 108 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 SPOPLQ6IQ16 392 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 FBXL6Q8N531 539 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 TAS1R2Q8TE23 839 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 MYLPFQ96A32 169 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 ASB16Q96NS5 453 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 SDCBP2Q9H190 292 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 ATXN3LQ9H3M9 355 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 MMRN2Q9H8L6 949 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 IL21Q9HBE4 155 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 SLC2A4RGQ9NR83 387 aa20.42■□□□□ 0.86
EPHB4-207ENST00000489808 TSC2P49815 1807 aa20.41■□□□□ 0.86
EPHB4-207ENST00000489808 CLSTN1O94985 981 aa20.41■□□□□ 0.86
EPHB4-207ENST00000489808 PDGFBP01127 241 aaPredicted RBP20.41■□□□□ 0.86
EPHB4-207ENST00000489808 CFHP08603 1231 aa20.41■□□□□ 0.86
EPHB4-207ENST00000489808 KRT39Q6A163 491 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms