RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 LILRA6Q6PI73 481 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 RNF19BQ6ZMZ0 732 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 TNIP3Q96KP6 325 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 CDX2Q99626 313 aaPredicted RBP17.14■□□□□ 0.33
CLIC4-203ENST00000489758 EDEM3Q9BZQ6 932 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
CLIC4-203ENST00000489758 GTF3C4Q9UKN8 822 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 CDH23Q9H251 3354 aa17.14■□□□□ 0.33
CLIC4-203ENST00000489758 TRANK1O15050 2925 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 A0A1W2PQJ5 194 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 TGM5O43548 720 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 C1RP00736 705 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 ADH1AP07327 375 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 PAEPP09466 180 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 KRT5P13647 590 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 CPB1P15086 417 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 KLRC2P26717 231 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 TBX2Q13207 712 aaPredicted RBP17.13■□□□□ 0.33
CLIC4-203ENST00000489758 KCNC3Q14003 757 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 DUSP6Q16828 381 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
CLIC4-203ENST00000489758 PALB2Q86YC2 1186 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
CLIC4-203ENST00000489758 ZNF461Q8TAF7 563 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 PCED1BQ96HM7 432 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 ZSWIM1Q9BR11 485 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 TLE6Q9H808 572 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 CAPN11Q9UMQ6 739 aa17.13■□□□□ 0.33
CLIC4-203ENST00000489758 MTMR11A4FU01 709 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CYP26A1O43174 497 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 ADCY5O95622 1261 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CALCAP01258 141 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CLCN1P35523 988 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 SOX5P35711 763 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 NRIP1P48552 1158 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CDR1P51861 262 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 HYAL1Q12794 435 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 GSE1Q14687 1217 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 TPGS2Q68CL5 300 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 MYLIPQ8WY64 445 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 MYLPFQ96A32 169 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 IQCDQ96DY2 449 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 HEXIM2Q96MH2 286 aaKnown RBP17.12■□□□□ 0.33
CLIC4-203ENST00000489758 PGLYRP2Q96PD5 576 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 SPAG5Q96R06 1193 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 B3GNT5Q9BYG0 378 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 CRISPLD1Q9H336 500 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 ACP6Q9NPH0 428 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 AFF4Q9UHB7 1163 aaKnown RBP17.12■□□□□ 0.33
CLIC4-203ENST00000489758 KIAA1257Q9ULG3 409 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 MYO6Q9UM54 1294 aa17.12■□□□□ 0.33
CLIC4-203ENST00000489758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLIC4-203ENST00000489758 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 SEC24AO95486 1093 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 GLUD1P00367 558 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 CCDC130P13994 396 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 ATF2P15336 505 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 IGFBP4P22692 258 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 CDC25BP30305 580 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 USP8P40818 1118 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 STAT1P42224 750 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 SMARCB1Q12824 385 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
CLIC4-203ENST00000489758 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
CLIC4-203ENST00000489758 PPFIBP1Q86W92 1011 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 ATAD1Q8NBU5 361 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
CLIC4-203ENST00000489758 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
CLIC4-203ENST00000489758 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
CLIC4-203ENST00000489758 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 FAM49BQ9NUQ9 324 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 FBXW11Q9UKB1 542 aa17.11■□□□□ 0.33
CLIC4-203ENST00000489758 CLDN5O00501 218 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 GFPT2O94808 682 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 SPATA31D3P0C874 917 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 VDRP11473 427 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 EPCAMP16422 314 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 CASP14P31944 242 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 MRE11P49959 708 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ZBED6P86452 979 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ADCY1Q08828 1119 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 TRIM14Q14142 442 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 E4F1Q66K89 784 aaPredicted RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ARHGAP17Q68EM7 881 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms