RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
TOP3B-217ENST00000489581 TRDMT1O14717 391 aaKnown RBP18.31■□□□□ 0.52
TOP3B-217ENST00000489581 TM4SF5O14894 197 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 ATG13O75143 517 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 RNF40O75150 1001 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 GPR15P49685 360 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 SMARCB1Q12824 385 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 SDHAF4Q5VUM1 108 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 DCP1BQ8IZD4 617 aaKnown RBP18.31■□□□□ 0.52
TOP3B-217ENST00000489581 RIN3Q8TB24 985 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 AK8Q96MA6 479 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 IKZF4Q9H2S9 585 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 TDP1Q9NUW8 608 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 TMLHEQ9NVH6 421 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 ZMYM5Q9UJ78 669 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 ANGPTL2Q9UKU9 493 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 AGO2Q9UKV8 859 aaKnown RBP18.31■□□□□ 0.52
TOP3B-217ENST00000489581 PCDHB5Q9Y5E4 795 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 NUP205Q92621 2012 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 ANAPC1Q9H1A4 1944 aa18.31■□□□□ 0.52
TOP3B-217ENST00000489581 KPNA7A9QM74 516 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 TBCAO75347 108 aaKnown RBP18.3■□□□□ 0.52
TOP3B-217ENST00000489581 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
TOP3B-217ENST00000489581 PLCG1P19174 1290 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 GALK1P51570 392 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 KARSQ15046 597 aaKnown RBP18.3■□□□□ 0.52
TOP3B-217ENST00000489581 STPG1Q5TH74 334 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 NAIF1Q69YI7 327 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-217ENST00000489581 CC2D1AQ6P1N0 951 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-217ENST00000489581 EFCAB13Q8IY85 973 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 RASSF8Q8NHQ8 419 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 RAD54LQ92698 747 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 HHIPQ96QV1 700 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 PI4K2AQ9BTU6 479 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 CFAP47Q6ZTR5 3102 aa18.3■□□□□ 0.52
TOP3B-217ENST00000489581 H3BQV1 296 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 SLC26A4O43511 780 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 DDX6P26196 483 aaKnown RBP eCLIP18.29■□□□□ 0.52
TOP3B-217ENST00000489581 GRIN1Q05586 938 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 SLFN12LQ6IEE8 588 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 TTC16Q8NEE8 873 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 MRPS31Q92665 395 aaKnown RBP18.29■□□□□ 0.52
TOP3B-217ENST00000489581 CCSER1Q9C0I3 900 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 STYXL1Q9Y6J8 313 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 THADAQ6YHU6 1953 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
TOP3B-217ENST00000489581 CSH1P0DML2 217 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 CSH2P0DML3 217 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 PMLP29590 882 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 MPLP40238 635 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 AMPD2Q01433 879 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 TSPY1Q01534 308 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
TOP3B-217ENST00000489581 SV2CQ496J9 727 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 PLA2G2CQ5R387 149 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 CRELD2Q6UXH1 353 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-217ENST00000489581 MON1AQ86VX9 555 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 CAMKK1Q8N5S9 505 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
TOP3B-217ENST00000489581 AKAP3O75969 853 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 DRD1P21728 446 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 GJB2P29033 226 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 ABCD1P33897 745 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 GJA4P35212 333 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 DDR2Q16832 855 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 PLK5Q496M5 336 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 RPLP0P6Q8NHW5 317 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 LARP4BQ92615 738 aaKnown RBP18.27■□□□□ 0.52
TOP3B-217ENST00000489581 ZC3H10Q96K80 434 aaKnown RBP18.27■□□□□ 0.52
TOP3B-217ENST00000489581 ZNF560Q96MR9 790 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 P2RY13Q9BPV8 354 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 PCDHGA5Q9Y5G8 931 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 KIAA1549LQ6ZVL6 1849 aa18.27■□□□□ 0.52
TOP3B-217ENST00000489581 LAMA1P25391 3075 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 DCLK1O15075 740 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 TADA3O75528 432 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ACAT1P24752 427 aaKnown RBP18.26■□□□□ 0.51
TOP3B-217ENST00000489581 CYP2F1P24903 491 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ADSSP30520 456 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 WNT7BP56706 349 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 PSMD2Q13200 908 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 PDGFRLQ15198 375 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 NFE2Q16621 373 aaPredicted RBP18.26■□□□□ 0.51
TOP3B-217ENST00000489581 TCEAL6Q6IPX3 200 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ZNF720Q7Z2F6 126 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 PDCL2Q8N4E4 241 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 KRI1Q8N9T8 703 aaKnown RBP18.26■□□□□ 0.51
TOP3B-217ENST00000489581 TCEAL3Q969E4 200 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 CYP2S1Q96SQ9 504 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 DUSP15Q9H1R2 295 aaPredicted RBP18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ECT2Q9H8V3 914 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 TRPC7Q9HCX4 862 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 VPS45Q9NRW7 570 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 AGAP1Q9UPQ3 857 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 CHD6Q8TD26 2715 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 ZFHX4Q86UP3 3567 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 MYOFQ9NZM1 2061 aa18.26■□□□□ 0.51
TOP3B-217ENST00000489581 SOBPA7XYQ1 873 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms