RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TMEM191BP0C7N4 346 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 EPB41P11171 864 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 POLR2BP30876 1174 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PTPN5P54829 565 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 TPM4P67936 248 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ENPEPQ07075 957 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 TWF1Q12792 350 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 BFSP1Q12934 665 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PSMD6Q15008 389 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 SLC5A9Q2M3M2 681 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 SCARA3Q6AZY7 606 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PARM1Q6UWI2 310 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 SIX5Q8N196 739 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 C1orf127Q8N9H9 656 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ZNF516Q92618 1163 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 FGF14Q92915 247 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ANKRD36BP1Q96IX9 119 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PGLYRP2Q96PD5 576 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 PDE11AQ9HCR9 933 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 AGAP1Q9UPQ3 857 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 FRMD4BQ9Y2L6 1034 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 R3HCC1Q9Y3T6 440 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 MYO10Q9HD67 2058 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 MUC6Q6W4X9 2439 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 DOCK8Q8NF50 2099 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TEX33O43247 280 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 VNN2O95498 520 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 CFHP08603 1231 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 PBX1P40424 430 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 ALDH1A3P47895 512 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 EPHB3P54753 998 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 EPHA5P54756 1037 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 RBP5P82980 135 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 DUSP4Q13115 394 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 NR1I3Q14994 352 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 CCDC40Q4G0X9 1142 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 IER5LQ5T953 404 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 DPY19L2P1Q6NXN4 242 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 FAM114A1Q8IWE2 563 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 PRSS33Q8NF86 280 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 FLCNQ8NFG4 579 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 SPATA18Q8TC71 538 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 C2orf15Q8WU43 125 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 ZCWPW1Q9H0M4 648 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 IRF2BPLQ9H1B7 796 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 CEP72Q9P209 647 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 ASB3Q9Y575 518 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 TRIOO75962 3097 aa11.31□□□□□ -0.6
SCAMP4-208ENST00000489554 LGALS16A8MUM7 142 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 HUS1O60921 280 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 ECI2O75521 394 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 FGF19O95750 216 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 TNNC2P02585 160 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 KRT19P08727 400 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 NPR3P17342 541 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CEBPBP17676 345 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 AOC1P19801 751 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 VAMP7P51809 220 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 ZNF75DP51815 510 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 TSPY1Q01534 308 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 PFKPQ01813 784 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 NHLH1Q02575 133 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 MYO1EQ12965 1108 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CWF19L1Q69YN2 538 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 ITIH5Q86UX2 942 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 DCP1BQ8IZD4 617 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 TMEM86AQ8N2M4 240 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 ATAD1Q8NBU5 361 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms