RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CCNE1P24864 410 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 LMO2P25791 158 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
CCL28-202ENST00000489442 TCERG1LQ5VWI1 586 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 C4orf50Q6ZRC1 276 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 LIMS2Q7Z4I7 341 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 SLC44A3Q8N4M1 653 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 CCDC150Q8NCX0 1101 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 TAF4BQ92750 862 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 PSMG2Q969U7 264 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 PBXIP1Q96AQ6 731 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 IPO9Q96P70 1041 aaKnown RBP14.31□□□□□ -0.12
CCL28-202ENST00000489442 MRPL45Q9BRJ2 306 aaKnown RBP14.31□□□□□ -0.12
CCL28-202ENST00000489442 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 DNAJC25Q9H1X3 360 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 FBXL21Q9UKT6 434 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 NUMBLQ9Y6R0 609 aa14.31□□□□□ -0.12
CCL28-202ENST00000489442 ZNF638Q14966 1978 aaKnown RBP14.31□□□□□ -0.12
CCL28-202ENST00000489442 MYBPHLA2RUH7 354 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 TRIM49BA6NDI0 452 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 A8MXQ7 604 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 ANHXE9PGG2 379 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 HCRTO43612 131 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 ATP2C2O75185 946 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 MICAL2O94851 1124 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 FGF19O95750 216 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 HLA-DRAP01903 254 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 GJA1P17302 382 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 CYP2F1P24903 491 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 CCR2P41597 374 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 RPL10AP62906 217 aaKnown RBP14.3□□□□□ -0.12
CCL28-202ENST00000489442 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 ENPEPQ07075 957 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 HTR4Q13639 388 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 MORC3Q14149 939 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 PRSS36Q5K4E3 855 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 PARM1Q6UWI2 310 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 GPR152Q8TDT2 470 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 FGF14Q92915 247 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 GBP4Q96PP9 640 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 GCNAQ96QF7 691 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 LPIN3Q9BQK8 851 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 SMOC2Q9H3U7 446 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 VRTNQ9H8Y1 702 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 TMEM8AQ9HCN3 771 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
CCL28-202ENST00000489442 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
CCL28-202ENST00000489442 A0A1W2PRU2 124 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 BICDL2A1A5D9 508 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 SLC16A3O15427 465 aaKnown RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 ATF6P18850 670 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 GABRR2P28476 465 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 GTF2H1P32780 548 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 EPHA5P54756 1037 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 CDH8P55286 799 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 PPP3CAQ08209 521 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 DDR2Q16832 855 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 ARHGAP15Q53QZ3 475 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 DCAF17Q5H9S7 520 aaPredicted RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 KRT39Q6A163 491 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 HFE2Q6ZVN8 426 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 SUGP1Q8IWZ8 645 aaKnown RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 NELFBQ8WX92 580 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 ELMO3Q96BJ8 720 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCL28-202ENST00000489442 KXD1Q9BQD3 176 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 GPR88Q9GZN0 384 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 ATXN3LQ9H3M9 355 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCL28-202ENST00000489442 ARMCX3Q9UH62 379 aaPredicted RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
CCL28-202ENST00000489442 DUSP12Q9UNI6 340 aa14.29□□□□□ -0.12
CCL28-202ENST00000489442 GOLGA6L22H0YM25 854 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 NARSO43776 548 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 ASS1P00966 412 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 CFHP08603 1231 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CSH1P0DML2 217 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CSH2P0DML3 217 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 SRFP11831 508 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
CCL28-202ENST00000489442 BMP6P22004 513 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 GRIK1P39086 918 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 RAP1GAPP47736 663 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 MXI1P50539 228 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 TEAD2Q15562 447 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CFAP221Q4G0U5 840 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 CCDC40Q4G0X9 1142 aa14.28□□□□□ -0.12
CCL28-202ENST00000489442 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms