RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 LRRTM3Q86VH5 581 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 SFR1Q86XK3 245 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 FAM160A2Q8N612 972 aaPredicted RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 MRPS31Q92665 395 aaKnown RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 MRPL44Q9H9J2 332 aaKnown RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 GKN1Q9NS71 199 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 UXTQ9UBK9 157 aaPredicted RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 STK17AQ9UEE5 414 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
SNX17-207ENST00000489402 SLC8A2Q9UPR5 921 aa10.09□□□□□ -0.79
SNX17-207ENST00000489402 GREB1Q4ZG55 1949 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 CCDC163A0A0D9SF12 145 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 HUS1O60921 280 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 RPP40O75818 363 aaKnown RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 ADRB1P08588 477 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 CCDC192P0DO97 292 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 GAP43P17677 238 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 TXLNAP40222 546 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 NLRP12P59046 1061 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 RPL10AP62906 217 aaKnown RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 TFAMQ00059 246 aaKnown RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 CCDC142Q17RM4 750 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 TMEM196Q5HYL7 178 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 C12orf50Q8NA57 414 aaPredicted RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 RIN3Q8TB24 985 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 USP13Q92995 863 aaPredicted RBP10.08□□□□□ -0.8
SNX17-207ENST00000489402 CHFRQ96EP1 664 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 LOXL4Q96JB6 756 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 ACCSQ96QU6 501 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 FAM83CQ9BQN1 747 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 PI4K2AQ9BTU6 479 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 EBF3Q9H4W6 596 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 TDP1Q9NUW8 608 aa10.08□□□□□ -0.8
SNX17-207ENST00000489402 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 ANTXRLA6NF34 631 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TRDMT1O14717 391 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 HCRTO43612 131 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 EXTL3O43909 919 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 GCNT3O95395 438 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 LDHAP00338 332 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 F11P03951 625 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 ITGB3P05106 788 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 HMGA1P17096 107 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 POLR2BP30876 1174 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 MYL7Q01449 175 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 KCNA1Q09470 495 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 RRAGBQ5VZM2 374 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 NAIF1Q69YI7 327 aaPredicted RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 TXNDC8Q6A555 127 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 FSTL4Q6MZW2 842 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 FAM173BQ6P4H8 233 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 PKN3Q6P5Z2 889 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 CACNA2D4Q7Z3S7 1137 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TMEM150AQ86TG1 271 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 MON1AQ86VX9 555 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 BRSK2Q8IWQ3 736 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 SYCP3Q8IZU3 236 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TMEM86AQ8N2M4 240 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 CPA6Q8N4T0 437 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 LEO1Q8WVC0 666 aaPredicted RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 ACBD6Q9BR61 282 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 FAM213AQ9BRX8 229 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 FGFBP2Q9BYJ0 223 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TRPC7Q9HCX4 862 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 ABCB6Q9NP58 842 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 HPS4Q9NQG7 708 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 AGAP1Q9UPQ3 857 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 CCL26Q9Y258 94 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
SNX17-207ENST00000489402 FRYQ5TBA9 3013 aa10.07□□□□□ -0.8
SNX17-207ENST00000489402 WDFY3Q8IZQ1 3526 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
SNX17-207ENST00000489402 AXIN1O15169 862 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 GDF9O60383 454 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 PPP1R37O75864 691 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 AKAP3O75969 853 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 KRT19P08727 400 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 TMEM191BP0C7N4 346 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 IDEP14735 1019 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 DRD1P21728 446 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 ADSSP30520 456 aa10.06□□□□□ -0.8
SNX17-207ENST00000489402 PXNP49023 591 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms