RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ARFIP2P53365 341 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 UCP3P55916 312 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 NXPH1P58417 271 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 LILRA4P59901 499 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 ITIH3Q06033 890 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 ERCC6LQ2NKX8 1250 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 NBPF8Q3BBV2 869 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 LONRF3Q496Y0 759 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 ANO6Q4KMQ2 910 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 ANKRD13AQ8IZ07 590 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 BOLLQ8N9W6 283 aaKnown RBP4.66□□□□□ -1.66
RFC4-213ENST00000489028 CAGE1Q8TC20 777 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 TSR2Q969E8 191 aaKnown RBP4.66□□□□□ -1.66
RFC4-213ENST00000489028 FAM136AQ96C01 138 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 TRIM54Q9BYV2 358 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 TPSD1Q9BZJ3 242 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 KLC4Q9NSK0 619 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 SEMA4GQ9NTN9 838 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 ASB6Q9NWX5 421 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 PLEKHM1Q9Y4G2 1056 aa4.66□□□□□ -1.66
RFC4-213ENST00000489028 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 PPM1DO15297 605 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 SOAT2O75908 522 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 ERBB2P04626 1255 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 SLC11A2P49281 568 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 MLC1Q15049 377 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 ARHGEF25Q86VW2 580 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 KIAA0319LQ8IZA0 1049 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 FKBP10Q96AY3 582 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 ZNF764Q96H86 408 aaPredicted RBP4.65□□□□□ -1.67
RFC4-213ENST00000489028 TMEM60Q9H2L4 133 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.65□□□□□ -1.67
RFC4-213ENST00000489028 KLHL42Q9P2K6 505 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 XPR1Q9UBH6 696 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 ST3GAL5Q9UNP4 418 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 SSX2IPQ9Y2D8 614 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.65□□□□□ -1.67
RFC4-213ENST00000489028 SPATA31A6Q5VVP1 1343 aa4.65□□□□□ -1.67
RFC4-213ENST00000489028 IGLV2-14P01704 120 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 NR2F6P10588 404 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 ITPKBP27987 946 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 LOXL3P58215 753 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 EIF2B5Q13144 721 aaKnown RBP4.64□□□□□ -1.67
RFC4-213ENST00000489028 LLGL1Q15334 1064 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 TBCCQ15814 346 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 ZIK1Q3SY52 487 aaPredicted RBP4.64□□□□□ -1.67
RFC4-213ENST00000489028 IL31RAQ8NI17 732 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 KBTBD7Q8WVZ9 684 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 MAML1Q92585 1016 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 PBKQ96KB5 322 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 C22orf23Q9BZE7 217 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 DPH1Q9BZG8 443 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 SMURF2Q9HAU4 748 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 CNNM1Q9NRU3 951 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 PIH1D1Q9NWS0 290 aaKnown RBP4.64□□□□□ -1.67
RFC4-213ENST00000489028 SLC17A6Q9P2U8 582 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 SERTAD3Q9UJW9 196 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 ENTPD2Q9Y5L3 495 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 COX11Q9Y6N1 276 aa4.64□□□□□ -1.67
RFC4-213ENST00000489028 A0A087WWL8 130 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 A0A1W2PPL8 197 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 TMEM233B4DJY2 109 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 hCG_1984214I3L0E3 225 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 MYO1FO00160 1098 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 TBX3O15119 743 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 ATXN1LP0C7T5 689 aaKnown RBP4.63□□□□□ -1.67
RFC4-213ENST00000489028 JUPP14923 745 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 VIPR2P41587 438 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 GALEQ14376 348 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 GRM3Q14832 879 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 IQCB1Q15051 598 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 MINDY4Q4G0A6 757 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 ARHGAP40Q5TG30 622 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 APOA5Q6Q788 366 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 MAEAQ7L5Y9 396 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 MAVSQ7Z434 540 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 ZNF280BQ86YH2 543 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 UROC1Q96N76 676 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 C1orf112Q9NSG2 853 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 ADAM21Q9UKJ8 722 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 MRPS17Q9Y2R5 130 aaKnown RBP4.63□□□□□ -1.67
RFC4-213ENST00000489028 TMX2Q9Y320 296 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 USP19O94966 1318 aa4.63□□□□□ -1.67
RFC4-213ENST00000489028 CCDC151A5D8V7 595 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 CAPN8A6NHC0 703 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 VSTM5A8MXK1 200 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 FAM227AF5H4B4 570 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 BTN3A1O00481 513 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 PHGDHO43175 533 aaKnown RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 URI1O94763 535 aaPredicted RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 ZFXP17010 805 aaPredicted RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 EN2P19622 333 aaPredicted RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 FBLP22087 321 aaKnown RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 PPIFP30405 207 aaKnown RBP4.62□□□□□ -1.67
RFC4-213ENST00000489028 LIPAP38571 399 aa4.62□□□□□ -1.67
RFC4-213ENST00000489028 PXNP49023 591 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms