RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MYBPC3Q14896 1274 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 TMEM132BQ14DG7 1078 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 PKN2Q16513 984 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ADCK5Q3MIX3 580 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 NRN1LQ496H8 165 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SLC9C2Q5TAH2 1124 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 MAP3K21Q5TCX8 1036 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SULT6B1Q6IMI4 303 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ACAD10Q6JQN1 1059 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 KIAA1841Q6NSI8 718 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 MIGA2Q7L4E1 593 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 BEND5Q7L4P6 421 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 MILR1Q7Z6M3 343 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 C2CD5Q86YS7 1000 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 GALNT13Q8IUC8 556 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 FAM126BQ8IXS8 530 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 KLHL36Q8N4N3 616 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 OR2I1PQ8NGU4 316 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 OR14C36Q8NHC7 312 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 Q8TCH9 128 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 IPCEF1Q8WWN9 437 aaPredicted RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ST8SIA4Q92187 359 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ZUFSPQ96AP4 578 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 MTFMTQ96DP5 389 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 NEIL1Q96FI4 390 aaPredicted RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 CHAMP1Q96JM3 812 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 YTHDC1Q96MU7 727 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 TIGD1Q96MW7 591 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 WWC2-AS2Q96NR7 200 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 P2RX7Q99572 595 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 TWSG1Q9GZX9 223 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 PAIP1Q9H074 479 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 RNPEPQ9H4A4 650 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 BARX1Q9HBU1 254 aaPredicted RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SLC6A20Q9NP91 592 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SAYSD1Q9NPB0 183 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ABCF3Q9NUQ8 709 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 FTSJ1Q9UET6 329 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 AFF4Q9UHB7 1163 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 VPS28Q9UK41 221 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 TCRBV5S2A0A599 114 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM43BA6NCK2 446 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 LRRC14BA6NHZ5 514 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TSPY2A6NKD2 308 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 DGKIO75912 1065 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 PGM3O95394 542 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TNFRSF6BO95407 300 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MLYCDO95822 493 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 RPLP2P05387 115 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 ANXA2P07355 339 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 CSF1P09603 554 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TSPY3P0CV98 308 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TSPY8P0CW00 308 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 GYS1P13807 737 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 PORP16435 677 aaPredicted RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 CHMP24386 653 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 GABRB3P28472 473 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 GJA4P35212 333 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 ACTN2P35609 894 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 POLD2P49005 469 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 SNX16P57768 344 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 NKX3-2P78367 333 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 CDK17Q00537 523 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TSPY1Q01534 308 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 PTH1RQ03431 593 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 ACVR2BQ13705 512 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TSTQ16762 297 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TIGD6Q17RP2 521 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MUM1L1Q5H9M0 696 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 STEAP3Q658P3 488 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 CASC1Q6TDU7 716 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 BTNL9Q6UXG8 535 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 B4GALNT4Q76KP1 1039 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 VSIG1Q86XK7 387 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TEX9Q8N6V9 391 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 GLIS1Q8NBF1 620 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 C3orf20Q8ND61 904 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 OR8H1Q8NGG4 311 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 PHOSPHO1Q8TCT1 267 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 IPO4Q8TEX9 1081 aaKnown RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 KBTBD7Q8WVZ9 684 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MAML1Q92585 1016 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 HOXB13Q92826 284 aaPredicted RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 ATP2A3Q93084 1043 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM43Q96BQ3 446 aaPredicted RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 SDCCAG3Q96C92 435 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MBD6Q96DN6 1003 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 IQCDQ96DY2 449 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MRGPRX4Q96LA9 322 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 CLIC6Q96NY7 704 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TWNKQ96RR1 684 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MYCBPQ99417 103 aaPredicted RBP3.82□□□□□ -1.8
PRPF4-203ENST00000488937 MYL10Q9BUA6 226 aa3.82□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM54Q9BYV2 358 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms