RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 VCPIP1Q96JH7 1222 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 CLPTM1LQ96KA5 538 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 FAM118BQ9BPY3 351 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 MAN1C1Q9NR34 630 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 GNL3LQ9NVN8 582 aaKnown RBP3.72□□□□□ -1.81
CCDC93-209ENST00000488908 SIDT1Q9NXL6 827 aaKnown RBP3.72□□□□□ -1.81
CCDC93-209ENST00000488908 CFAP97Q9P2B7 532 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 KLHL13Q9P2N7 655 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 RAD54BQ9Y620 910 aa3.72□□□□□ -1.81
CCDC93-209ENST00000488908 H7C1Q1 480 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 USP1O94782 785 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 IL6RP08887 468 aaPredicted RBP3.71□□□□□ -1.82
CCDC93-209ENST00000488908 NPSP0C0P6 89 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 CPEP16870 476 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 CHRM3P20309 590 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 IL1R2P27930 398 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 CYP2C19P33261 490 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 ZNF135P52742 658 aaPredicted RBP3.71□□□□□ -1.82
CCDC93-209ENST00000488908 HTRA4P83105 476 aaPredicted RBP3.71□□□□□ -1.82
CCDC93-209ENST00000488908 SFRP4Q6FHJ7 346 aaPredicted RBP3.71□□□□□ -1.82
CCDC93-209ENST00000488908 PPP4R3AQ6IN85 833 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 MAVSQ7Z434 540 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 JAZF1Q86VZ6 243 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 LRRC71Q8N4P6 559 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 ACRBPQ8NEB7 543 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 COQ8BQ96D53 544 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 DAZAP1Q96EP5 407 aaKnown RBP3.71□□□□□ -1.82
CCDC93-209ENST00000488908 RITA1Q96K30 269 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 DRC1Q96MC2 740 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 FSD1LQ9BXM9 530 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 ADAMTS5Q9UNA0 930 aa3.71□□□□□ -1.82
CCDC93-209ENST00000488908 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 POC1B-GALNT4F8VUJ3 575 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 VPS4BO75351 444 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 RPLP2P05387 115 aaKnown RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 GJB1P08034 283 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 CHRM5P08912 532 aaPredicted RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 ATP5F1P24539 256 aaPredicted RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 LIPAP38571 399 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 THBS3P49746 956 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 CLCN2P51788 898 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 PDE1AP54750 535 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 GYS2P54840 703 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 ERVK-21P61565 698 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 CLUL1Q15846 466 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 CT47A1Q5JQC4 288 aaPredicted RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 TREML2Q5T2D2 321 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 ICE2Q659A1 982 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 GALNT4Q8N4A0 578 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 AFAP1L2Q8N4X5 818 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 RP9Q8TA86 221 aaKnown RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 CUL5Q93034 780 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 ZC3H10Q96K80 434 aaKnown RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 LYZL4Q96KX0 146 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 MACROD1Q9BQ69 325 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 GPR35Q9HC97 309 aa3.7□□□□□ -1.82
CCDC93-209ENST00000488908 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
CCDC93-209ENST00000488908 LY6G6EA0A0G2JKS1 128 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 FAM90A8PA6NJQ4 464 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 CYSRT1A8MQ03 144 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 UBE2Q2LH0YL09 131 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 F2RL2O00254 374 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 ENPP3O14638 875 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 NDUFS2O75306 463 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 ALPLP05186 524 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 FAM90A13PP0C7W8 464 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 FAM90A24PP0C7X0 464 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 GCLCP48506 637 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-209ENST00000488908 TCF15Q12870 199 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 IL10RAQ13651 578 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 SEMA3AQ14563 771 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 RBMS2Q15434 407 aaKnown RBP3.69□□□□□ -1.82
CCDC93-209ENST00000488908 PARS2Q7L3T8 475 aaKnown RBP3.69□□□□□ -1.82
CCDC93-209ENST00000488908 CHAC2Q8WUX2 184 aa3.69□□□□□ -1.82
CCDC93-209ENST00000488908 SCAF8Q9UPN6 1271 aaKnown RBP3.69□□□□□ -1.82
CCDC93-209ENST00000488908 CD8B2A6NJW9 211 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 TRIM75PA6NK02 468 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 FCHO1O14526 889 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 DSCR3O14972 297 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 KIF20AO95235 890 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 FESP07332 822 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 RARBP10826 455 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 CYP2A6P11509 494 aaPredicted RBP3.68□□□□□ -1.82
CCDC93-209ENST00000488908 MALP21145 153 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 KCNJ5P48544 419 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 TOB1P50616 345 aaPredicted RBP3.68□□□□□ -1.82
CCDC93-209ENST00000488908 ERV3-1Q14264 604 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 C10orf25Q5T742 122 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 FCRL6Q6DN72 434 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 SLC4A10Q6U841 1118 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 KIRREL2Q6UWL6 708 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 TMEM108Q6UXF1 575 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 SPATS2Q86XZ4 545 aaKnown RBP3.68□□□□□ -1.82
CCDC93-209ENST00000488908 PUS7Q96PZ0 661 aaKnown RBP3.68□□□□□ -1.82
CCDC93-209ENST00000488908 DMRTA2Q96SC8 542 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 TINAGL1Q9GZM7 467 aaPredicted RBP3.68□□□□□ -1.82
CCDC93-209ENST00000488908 TUBD1Q9UJT1 453 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 IPPQ9Y573 584 aa3.68□□□□□ -1.82
CCDC93-209ENST00000488908 K7ESF4 209 aa3.67□□□□□ -1.82
CCDC93-209ENST00000488908 GPR39O43194 453 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms