RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ZFXP17010 805 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-212ENST00000488896 IL12RB1P42701 662 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 LILRA4P59901 499 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 RAB1AP62820 205 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 FGL2Q14314 439 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 AMOTQ4VCS5 1084 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 ODR4Q5SWX8 454 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 DAAM2Q86T65 1068 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 RAVER1Q8IY67 606 aaKnown RBP6.05□□□□□ -1.44
PTPN4-212ENST00000488896 RFKQ969G6 155 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 NT5C1BQ96P26 610 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 P2RX7Q99572 595 aaKnown RBP6.05□□□□□ -1.44
PTPN4-212ENST00000488896 ACO2Q99798 780 aaKnown RBP6.05□□□□□ -1.44
PTPN4-212ENST00000488896 ALG8Q9BVK2 526 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 EHD3Q9NZN3 535 aa6.05□□□□□ -1.44
PTPN4-212ENST00000488896 UBXN7O94888 489 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-212ENST00000488896 SP2Q02086 613 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 IQCB1Q15051 598 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 ARHGAP40Q5TG30 622 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 EMC10Q5UCC4 262 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 ZBTB34Q8NCN2 500 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 TIMP4Q99727 224 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 CDH19Q9H159 772 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 ANLNQ9NQW6 1124 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 PLEKHM1Q9Y4G2 1056 aa6.04□□□□□ -1.44
PTPN4-212ENST00000488896 ATXN1LP0C7T5 689 aaKnown RBP6.03□□□□□ -1.44
PTPN4-212ENST00000488896 NDUFB7P17568 137 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 CCT8P50990 548 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 CLCN2P51788 898 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 EPHB1P54762 984 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 UCP3P55916 312 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 BMPR2Q13873 1038 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 PLAC9Q5JTB6 97 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 ICE2Q659A1 982 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 SLC35G2Q8TBE7 412 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 SARAFQ96BY9 339 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 AIFM3Q96NN9 605 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 XPR1Q9UBH6 696 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 GABBR1Q9UBS5 961 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 ADAM21Q9UKJ8 722 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 THRAP3Q9Y2W1 955 aaKnown RBP6.03□□□□□ -1.44
PTPN4-212ENST00000488896 TMX2Q9Y320 296 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 WNT6Q9Y6F9 365 aa6.03□□□□□ -1.44
PTPN4-212ENST00000488896 MANSC4A6NHS7 340 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 hCG_1984214I3L0E3 225 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 MYO1CO00159 1063 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 KITP10721 976 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 LOXL3P58215 753 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 PROK1P58294 105 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 RGS7BPQ6MZT1 257 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 B3GNT9Q6UX72 402 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 ZNF788Q6ZQV5 615 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 EPM2AIP1Q7L775 607 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 MAVSQ7Z434 540 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 COL23A1Q86Y22 540 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 FAM109AQ8N4B1 249 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 ATRIPQ8WXE1 791 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 MRGPRX1Q96LB2 322 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 TAAR9Q96RI9 348 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 NELL2Q99435 816 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 ARHGEF3Q9NR81 526 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 PIH1D1Q9NWS0 290 aaKnown RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 PADI4Q9UM07 663 aa6.02□□□□□ -1.45
PTPN4-212ENST00000488896 MRPS17Q9Y2R5 130 aaKnown RBP6.02□□□□□ -1.45
PTPN4-212ENST00000488896 A0A088AWK7 358 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 A0A1W2PPL8 197 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 H3BML4 177 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 PROP1O75360 226 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 RBMXL2O75526 392 aaKnown RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 NXPH3O95157 252 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 ERBB2P04626 1255 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 WT1P19544 449 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 ITPKBP27987 946 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 ALDH9A1P49189 494 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 GTF2H3Q13889 308 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 LRRC41Q15345 812 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 TMEM119Q4V9L6 283 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 COLEC12Q5KU26 742 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 SFRP4Q6FHJ7 346 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 ZNF551Q7Z340 670 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 PTDSS2Q9BVG9 487 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 ZMAT3Q9HA38 289 aaKnown RBP6.01□□□□□ -1.45
PTPN4-212ENST00000488896 FRMD4BQ9Y2L6 1034 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 SHROOM4Q9ULL8 1493 aa6.01□□□□□ -1.45
PTPN4-212ENST00000488896 CTNND1O60716 968 aaKnown RBP6□□□□□ -1.45
PTPN4-212ENST00000488896 HNRNPCP07910 306 aaKnown RBP eCLIP6□□□□□ -1.45
PTPN4-212ENST00000488896 JUPP14923 745 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 DRD4P21917 467 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 LIPAP38571 399 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 SLC11A2P49281 568 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 PDE1AP54750 535 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 NHLH1Q02575 133 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 PLEKHG6Q3KR16 790 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 ZNF618Q5T7W0 954 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 ZKSCAN2Q63HK3 967 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 MPP5Q8N3R9 675 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 SLC15A4Q8N697 577 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms