RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MYLPFQ96A32 169 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 ACBD6Q9BR61 282 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 FAM124BQ9H5Z6 455 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-209ENST00000488860 ACP6Q9NPH0 428 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 IMPACTQ9P2X3 320 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 MYO6Q9UM54 1294 aa13.11□□□□□ -0.31
TRAIP-209ENST00000488860 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 FSCN2O14926 492 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 ADAM12O43184 909 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 PAEPP09466 180 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 FERP16591 822 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 ADORA2BP29275 332 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 OR1D2P34982 312 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 CLCN1P35523 988 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 PTK2Q05397 1052 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 SGO2Q562F6 1265 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 ZCWPW1Q9H0M4 648 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
TRAIP-209ENST00000488860 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 CNTN6Q9UQ52 1028 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
TRAIP-209ENST00000488860 TMEM265A0A087WTH1 108 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 MYBPHLA2RUH7 354 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 TEX28O15482 410 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 CNPP09543 421 aaKnown RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 CCDC172P0C7W6 258 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 VDRP11473 427 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 NDUFV1P49821 464 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 BPIFB4P59827 614 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 ROR1Q01973 937 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 KLHL30Q0D2K2 578 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 CAMK1Q14012 370 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 PTPROQ16827 1216 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 GOLGA7BQ2TAP0 167 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 SPATA2LQ8IUW3 424 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 SLC2A14Q8TDB8 520 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 SLC20A1Q8WUM9 679 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 FAM161BQ96MY7 647 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 TTYH1Q9H313 450 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 PRDM12Q9H4Q4 367 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 ABI2Q9NYB9 513 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-209ENST00000488860 MYO7AQ13402 2215 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 TRANK1O15050 2925 aa13.09□□□□□ -0.31
TRAIP-209ENST00000488860 GREB1Q4ZG55 1949 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 FAM170AA1A519 330 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 WDR27A2RRH5 827 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 M0QYV0 167 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 CLDN5O00501 218 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 MED7O43513 233 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 ADH1AP07327 375 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 SKILP12757 684 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 CYP11B1P15538 503 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 KLRC2P26717 231 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 GSDMDP57764 484 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 ARID5BQ14865 1188 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 MAPRE1Q15691 268 aaKnown RBP13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
TRAIP-209ENST00000488860 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PDE12Q6L8Q7 609 aaKnown RBP13.08□□□□□ -0.32
TRAIP-209ENST00000488860 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 ADGRD2Q7Z7M1 963 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 NOP9Q86U38 636 aaKnown RBP13.08□□□□□ -0.32
TRAIP-209ENST00000488860 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 LRRTM3Q86VH5 581 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 PASD1Q8IV76 773 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 CRYBG2Q8N1P7 616 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 EPS8L1Q8TE68 723 aa13.08□□□□□ -0.32
TRAIP-209ENST00000488860 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms