RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SCARA5Q6ZMJ2 495 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 AVENQ9NQS1 362 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-217ENST00000488801 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 PRRG1O14668 218 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 CCL16O15467 120 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 ATP2C2O75185 946 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 ATF6P18850 670 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 ELF1P32519 619 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 GNL1P36915 607 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-217ENST00000488801 EPHA5P54756 1037 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 CDKAL1Q5VV42 579 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 FUBP3Q96I24 572 aaKnown RBP eCLIP19.92■□□□□ 0.78
PTCD3-217ENST00000488801 NECAB3Q96P71 396 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-217ENST00000488801 DPEP3Q9H4B8 488 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 CYP3A43Q9HB55 503 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 CEP72Q9P209 647 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 HMGXB4Q9UGU5 601 aa19.92■□□□□ 0.78
PTCD3-217ENST00000488801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.92■□□□□ 0.78
PTCD3-217ENST00000488801 XYLBO75191 536 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 AFPP02771 609 aaKnown RBP19.91■□□□□ 0.78
PTCD3-217ENST00000488801 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
PTCD3-217ENST00000488801 PSMC1P62191 440 aaKnown RBP19.91■□□□□ 0.78
PTCD3-217ENST00000488801 TWF1Q12792 350 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 UNC93AQ86WB7 457 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 UBR7Q8N806 425 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 B3GALNT2Q8NCR0 500 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 OR6B3Q8NGW1 331 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 MYCBPAPQ8TBZ2 947 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 WHAMMQ8TF30 809 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 LRRC3Q9BY71 257 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 SNX25Q9H3E2 840 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 SAMSN1Q9NSI8 373 aaKnown RBP19.91■□□□□ 0.78
PTCD3-217ENST00000488801 DNMT3BQ9UBC3 853 aaKnown RBP19.91■□□□□ 0.78
PTCD3-217ENST00000488801 GTF3C4Q9UKN8 822 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 USTQ9Y2C2 406 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 NFE2L3Q9Y4A8 694 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 PCDHB5Q9Y5E4 795 aa19.91■□□□□ 0.78
PTCD3-217ENST00000488801 COL4A2P08572 1712 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 CILPO75339 1184 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 LRG1P02750 347 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 MAGEA11P43364 429 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 PLD1Q13393 1074 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 NCAPHQ15003 741 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 MAPRE1Q15691 268 aaKnown RBP19.9■□□□□ 0.78
PTCD3-217ENST00000488801 MIIPQ5JXC2 388 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 FAM114A1Q8IWE2 563 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 TATDN2Q93075 761 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 MYLPFQ96A32 169 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 PCED1BQ96HM7 432 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 UHRF1Q96T88 793 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-217ENST00000488801 ARID3AQ99856 593 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 COL25A1Q9BXS0 654 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-217ENST00000488801 HSD3B7Q9H2F3 369 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 CD320Q9NPF0 282 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTCD3-217ENST00000488801 HCFC1R1Q9NWW0 138 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 ABI2Q9NYB9 513 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-217ENST00000488801 SLC27A5Q9Y2P5 690 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 TRIOO75962 3097 aa19.9■□□□□ 0.78
PTCD3-217ENST00000488801 GTPBP10A4D1E9 387 aaKnown RBP19.89■□□□□ 0.77
PTCD3-217ENST00000488801 A8MXQ7 604 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 PDGFRBP09619 1106 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 TUFMP49411 452 aaKnown RBP19.89■□□□□ 0.77
PTCD3-217ENST00000488801 MAN2A1Q16706 1144 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 PRSS36Q5K4E3 855 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 GRASPQ7Z6J2 395 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-217ENST00000488801 TMC8Q8IU68 726 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 CRYBG2Q8N1P7 616 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 CCDC150Q8NCX0 1101 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 TWNKQ96RR1 684 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 BPIFA3Q9BQP9 254 aa19.89■□□□□ 0.77
PTCD3-217ENST00000488801 SOAT2O75908 522 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 PTPN1P18031 435 aaKnown RBP19.88■□□□□ 0.77
PTCD3-217ENST00000488801 EEF1GP26641 437 aaKnown RBP19.88■□□□□ 0.77
PTCD3-217ENST00000488801 NDST1P52848 882 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 NTHL1P78549 312 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 CUL2Q13617 745 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 TPD52L1Q16890 204 aaPredicted RBP19.88■□□□□ 0.77
PTCD3-217ENST00000488801 SLC5A9Q2M3M2 681 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 C4orf50Q6ZRC1 276 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 PSMG2Q969U7 264 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 LPIN3Q9BQK8 851 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 TMEM30AQ9NV96 361 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 ASB3Q9Y575 518 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 TECTAO75443 2155 aa19.88■□□□□ 0.77
PTCD3-217ENST00000488801 KCNJ18B7U540 433 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 C2CD4DB7Z1M9 353 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 NRG2O14511 850 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-217ENST00000488801 RHOP08100 348 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 ZNF18P17022 549 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 PTPN2P17706 415 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 CYP2F1P24903 491 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 MYL5Q02045 173 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 KCNJ12Q14500 433 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 SKOR2Q2VWA4 1001 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-217ENST00000488801 PABPC1LQ4VXU2 614 aaKnown RBP19.87■□□□□ 0.77
PTCD3-217ENST00000488801 TCP11X2Q5H9J9 407 aa19.87■□□□□ 0.77
PTCD3-217ENST00000488801 MDH1BQ5I0G3 518 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms