RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 TAF6P49848 677 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 NLRP12P59046 1061 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 RESTQ13127 1097 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 RUNX3Q13761 415 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 PKP1Q13835 747 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
TTC3-221ENST00000488522 MGAT5BQ3V5L5 792 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 NT5DC4Q86YG4 428 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 TTC8Q8TAM2 541 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 RIN3Q8TB24 985 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
TTC3-221ENST00000488522 CDK5RAP3Q96JB5 506 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 ZSCAN16Q9H4T2 348 aaPredicted RBP13.24□□□□□ -0.29
TTC3-221ENST00000488522 GKN1Q9NS71 199 aa13.24□□□□□ -0.29
TTC3-221ENST00000488522 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 MYO16Q9Y6X6 1858 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
TTC3-221ENST00000488522 FBXO43Q4G163 708 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 AASDHQ4L235 1098 aaPredicted RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 SLFN12LQ6IEE8 588 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 METTL23Q86XA0 190 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 TRMT2BQ96GJ1 504 aaKnown RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 PLIN2Q99541 437 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 SMG9Q9H0W8 520 aaKnown RBP13.23□□□□□ -0.29
TTC3-221ENST00000488522 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 ANGPTL2Q9UKU9 493 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 CCL26Q9Y258 94 aa13.23□□□□□ -0.29
TTC3-221ENST00000488522 ANKRD63C9JTQ0 380 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 CYB561D2O14569 222 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 TADA3O75528 432 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 PPP1R37O75864 691 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 FAM13AO94988 1023 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 F13A1P00488 732 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 CSH1P0DML2 217 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 CSH2P0DML3 217 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 DRD1P21728 446 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 DDIT3P35638 169 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 AVPR1AP37288 418 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 ACOT2P49753 483 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 NUCB2P80303 420 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 AMPD2Q01433 879 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 N4BP2L1Q5TBK1 243 aaPredicted RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 WSCD1Q658N2 575 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 MON1AQ86VX9 555 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 EFCAB13Q8IY85 973 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 DCP1BQ8IZD4 617 aaKnown RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 MYCT1Q8N699 235 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 C12orf50Q8NA57 414 aaPredicted RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 PYM1Q9BRP8 204 aaKnown RBP13.22□□□□□ -0.29
TTC3-221ENST00000488522 ARRDC1-AS1Q9H2J1 176 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 VPS45Q9NRW7 570 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 RXFP3Q9NSD7 469 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 DPP3Q9NY33 737 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
TTC3-221ENST00000488522 IGF2RP11717 2491 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 ANAPC1Q9H1A4 1944 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 ZZEF1O43149 2961 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 KPNA7A9QM74 516 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 AXIN1O15169 862 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 RNF40O75150 1001 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 NOL4O94818 638 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 TCF3P15923 654 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 PLCG1P19174 1290 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 PNPLA4P41247 253 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 BFSP1Q12934 665 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 USP4Q13107 963 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 NFE2Q16621 373 aaPredicted RBP13.21□□□□□ -0.29
TTC3-221ENST00000488522 SV2CQ496J9 727 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 PLK5Q496M5 336 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 STPG1Q5TH74 334 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 SYT13Q7L8C5 426 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 GIPC2Q8TF65 315 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 RAD54LQ92698 747 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 FAM212AQ96EL1 285 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
TTC3-221ENST00000488522 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
TTC3-221ENST00000488522 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
TTC3-221ENST00000488522 TMEM206Q9H813 350 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms