RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 C4orf50Q6ZRC1 276 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 C12orf76Q8N812 135 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-219ENST00000488186 SLC7A14Q8TBB6 771 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 SPPL2BQ8TCT7 592 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 NT5C1AQ9BXI3 368 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 RHOBTB2Q9BYZ6 727 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 SDCBP2Q9H190 292 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 PIDD1Q9HB75 910 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 UBE2TQ9NPD8 197 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-219ENST00000488186 CISHQ9NSE2 258 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-219ENST00000488186 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
C9orf3-219ENST00000488186 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 MTMR11A4FU01 709 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 HCRTO43612 131 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ATP2C2O75185 946 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 XYLBO75191 536 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 TBX10O75333 385 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ZMYND10O75800 440 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 BMP1P13497 986 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ATP1A3P13637 1013 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ALDH1A3P47895 512 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 TUFMP49411 452 aaKnown RBP16.77■□□□□ 0.28
C9orf3-219ENST00000488186 MFAP3P55082 362 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ZNF445P59923 1031 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 UBXN1Q04323 297 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ITIH3Q06033 890 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 DLX2Q07687 328 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-219ENST00000488186 DUSP4Q13115 394 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ZNF394Q53GI3 561 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 MDH1BQ5I0G3 518 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 TRIM65Q6PJ69 517 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 TMC5Q6UXY8 1006 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ACOT1Q86TX2 421 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 LRRTM3Q86VH5 581 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ATAD1Q8NBU5 361 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 LMO3Q8TAP4 145 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 SEPT5Q99719 369 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-219ENST00000488186 MED10Q9BTT4 135 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 FAM124BQ9H5Z6 455 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-219ENST00000488186 ZDHHC7Q9NXF8 308 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 SLC27A5Q9Y2P5 690 aa16.77■□□□□ 0.28
C9orf3-219ENST00000488186 VCANP13611 3396 aa16.77■□□□□ 0.27
C9orf3-219ENST00000488186 MYBPHLA2RUH7 354 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 RFPL2O75678 378 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 PON1P27169 355 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 GCNT1Q02742 428 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 PLD1Q13393 1074 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 ATAT1Q5SQI0 421 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 ENOSF1Q7L5Y1 443 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 SMRP1Q8NCR6 262 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 RNF214Q8ND24 703 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-219ENST00000488186 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 HEXIM2Q96MH2 286 aaKnown RBP16.76■□□□□ 0.27
C9orf3-219ENST00000488186 ARID3AQ99856 593 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 DPEP3Q9H4B8 488 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
C9orf3-219ENST00000488186 ATP8B3O60423 1300 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 LGALS16A8MUM7 142 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 CCL16O15467 120 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 CILPO75339 1184 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 SEC24AO95486 1093 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 HNRNPA1P09651 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
C9orf3-219ENST00000488186 EPHB3P54753 998 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 TFF2Q03403 129 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 INCA1Q0VD86 236 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 TWF1Q12792 350 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 ORC1Q13415 861 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 SMAD4Q13485 552 aaKnown RBP16.75■□□□□ 0.27
C9orf3-219ENST00000488186 TAF12Q16514 161 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 PHLDB3Q6NSJ2 640 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 FAM171BQ6P995 826 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 SYCE2Q6PIF2 218 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
C9orf3-219ENST00000488186 MYLPFQ96A32 169 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 ZNF512Q96ME7 567 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-219ENST00000488186 RIPOR3Q96MK2 946 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 LSM14BQ9BX40 385 aaKnown RBP16.75■□□□□ 0.27
C9orf3-219ENST00000488186 PRKD2Q9BZL6 878 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 HSD3B7Q9H2F3 369 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 ADAM7Q9H2U9 754 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 TMLHEQ9NVH6 421 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 INSL5Q9Y5Q6 135 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
C9orf3-219ENST00000488186 KRT5P13647 590 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms