RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ITGA4P13612 1032 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 RARGP13631 454 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 XBP1P17861 261 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TAC1P20366 129 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CRABP2P29373 138 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SERPINB3P29508 390 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 HOXC9P31274 260 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 IL15P40933 162 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MTTPP55157 894 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ADARP55265 1226 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 NPEPPSP55786 919 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 HDAC4P56524 1084 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PDE1BQ01064 536 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DSG1Q02413 1049 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 STRN3Q13033 797 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CYLC2Q14093 348 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 NPY5RQ15761 445 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CCDC6Q16204 474 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ACSBG2Q5FVE4 666 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 EARS2Q5JPH6 523 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TMEM53Q6P2H8 277 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 OLFML1Q6UWY5 402 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 B3GNT6Q6ZMB0 384 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PPP1R21Q6ZMI0 780 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ANKS3Q6ZW76 656 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TMEM110Q86TL2 294 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 VSIG1Q86XK7 387 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MYOCDQ8IZQ8 938 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 RIBC1Q8N443 379 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 FNDC8Q8TC99 324 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DQX1Q8TE96 717 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 HES6Q96HZ4 224 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 LRRC37BQ96QE4 947 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MIPEPQ99797 713 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 WDR18Q9BV38 432 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 GRHL1Q9NZI5 618 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 LGALS13Q9UHV8 139 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 HAO1Q9UJM8 370 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CROTQ9UKG9 612 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DENND2AQ9ULE3 1009 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 STRIP2Q9ULQ0 834 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZNRF3Q9ULT6 936 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PACSIN2Q9UNF0 486 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CTDP1Q9Y5B0 961 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DIP2BQ9P265 1576 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 NUP188Q5SRE5 1749 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 RICTORQ6R327 1708 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DOCK2Q92608 1830 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ALS2Q96Q42 1657 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 LRP5O75197 1615 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PFASO15067 1338 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SPATA31A3Q5VYP0 1347 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DLL1O00548 723 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SMAD7O15105 426 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 GSC2O15499 205 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DNAJA2O60884 412 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 KRT36O76013 467 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZWINTO95229 277 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ATE1O95260 518 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 UBTFL6P0CB48 400 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 NAT1P18440 290 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MUTP22033 750 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 GTF2H1P32780 548 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 NEK3P51956 506 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SLC18A1P54219 525 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DR1Q01658 176 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CDR2Q01850 454 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MAPK7Q13164 816 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 HLFQ16534 295 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 IL17AQ16552 155 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ZCWPW2Q504Y3 356 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PDCD4Q53EL6 469 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CFAP157Q5JU67 520 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 WIPI1Q5MNZ9 446 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MFSD4BQ5TF39 518 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ANKRD40Q6AI12 368 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CENPPQ6IPU0 288 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 BORAQ6PGQ7 559 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 Q6ZNX1 250 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PRR23CQ6ZRP0 262 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ARHGEF18Q6ZSZ5 1173 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TMTC3Q6ZXV5 915 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 TRMT10CQ7L0Y3 403 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 CYFIP1Q7L576 1253 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ADGRG6Q86SQ4 1221 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 C12orf40Q86WS4 652 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 MAP7D3Q8IWC1 876 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SCUBE1Q8IWY4 988 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 SAMD3Q8N6K7 520 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DEPTORQ8TB45 409 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 PIP4K2CQ8TBX8 421 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 C10orf82Q8WW14 230 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 ESR2Q92731 530 aa5.03□□□□□ -1.6
CDC42BPA-213ENST00000488131 DGCR14Q96DF8 476 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms