RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 JDP2Q8WYK2 163 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 FNBP1Q96RU3 617 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 PPARGC1AQ9UBK2 798 aaKnown RBP14.91□□□□□ -0.02
COL16A1-214ENST00000488128 TCRBV7S3A2A0A539 114 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 OPHN1O60890 802 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 RNASEH1O60930 286 aaKnown RBP14.91□□□□□ -0.02
COL16A1-214ENST00000488128 ZWINTO95229 277 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 KRT1P04264 644 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 GDF10P55107 478 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 PDCD2Q16342 344 aaPredicted RBP14.91□□□□□ -0.02
COL16A1-214ENST00000488128 RIPOR1Q6ZS17 1223 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 CENPUQ71F23 418 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 RBM15BQ8NDT2 890 aaKnown RBP14.91□□□□□ -0.02
COL16A1-214ENST00000488128 ZFAND2BQ8WV99 257 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 STRA6Q9BX79 667 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 RABGEF1Q9UJ41 708 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 IVNS1ABPQ9Y6Y0 642 aa14.91□□□□□ -0.02
COL16A1-214ENST00000488128 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 F8VP50 259 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 PLSCR1O15162 318 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 LPXNO60711 386 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 FAM155BO75949 473 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SORBS2O94875 1100 aaKnown RBP14.9□□□□□ -0.02
COL16A1-214ENST00000488128 ABHD2P08910 425 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SCNN1BP51168 640 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 HIF1AQ16665 826 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SMTNL2Q2TAL5 461 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 LRRC23Q53EV4 343 aaPredicted RBP14.9□□□□□ -0.02
COL16A1-214ENST00000488128 CDAN1Q8IWY9 1227 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 EFCAB3Q8N7B9 438 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 GMCL1P1Q8NEA9 526 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 PYDC1Q8WXC3 89 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 GMCL1Q96IK5 515 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SMYD3Q9H7B4 428 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 TMEM206Q9H813 350 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SCAF8Q9UPN6 1271 aaKnown RBP14.9□□□□□ -0.02
COL16A1-214ENST00000488128 CHMP2BQ9UQN3 213 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 DENND3A2RUS2 1198 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 OR6B1O95007 311 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 CDK16Q00536 496 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 MIER3Q7Z3K6 550 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 FBXO36Q8NEA4 188 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 LMCD1Q9NZU5 365 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 SERPINA10Q9UK55 444 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
COL16A1-214ENST00000488128 DLDP09622 509 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 PYGBP11216 843 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 ANPEPP15144 967 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 SLC1A1P43005 524 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 ALDH18A1P54886 795 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 IRX4P78413 519 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 MAMLD1Q13495 774 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 CMPK2Q5EBM0 449 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 C1orf146Q5VVC0 180 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 SCARA3Q6AZY7 606 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 PALM2Q8IXS6 379 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 OXNAD1Q96HP4 312 aaPredicted RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 SERAC1Q96JX3 654 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 PANX3Q96QZ0 392 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 WDR11Q9BZH6 1224 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 YDJCA8MPS7 323 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 GSTA2P09210 222 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 RARBP10826 455 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 ZRSR2Q15696 482 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 LPCAT4Q643R3 524 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 RAPH1Q70E73 1250 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 CCDC124Q96CT7 223 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 TTC25Q96NG3 672 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 TRAPPC9Q96Q05 1148 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 WDR83Q9BRX9 315 aaKnown RBP14.89□□□□□ -0.03
COL16A1-214ENST00000488128 TIPINQ9BVW5 301 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 ARHGEF4Q9NR80 690 aa14.89□□□□□ -0.03
COL16A1-214ENST00000488128 C10orf71Q711Q0 1435 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 CYB561D2O14569 222 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 ATP2A1O14983 1001 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 ALOX15BO15296 676 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 TMEM270Q6UE05 265 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 CDHR3Q6ZTQ4 885 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 ARID3BQ8IVW6 561 aaPredicted RBP14.88□□□□□ -0.03
COL16A1-214ENST00000488128 DNAJC1Q96KC8 554 aaKnown RBP14.88□□□□□ -0.03
COL16A1-214ENST00000488128 FAM213AQ9BRX8 229 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 TEKT3Q9BXF9 490 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 SLC13A1Q9BZW2 595 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 ETNK2Q9NVF9 386 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 TXNDC9O14530 226 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 P4HA2O15460 535 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 RAD17O75943 681 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 MT-ND3P03897 115 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 RARRES1P49788 294 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 STAT2P52630 851 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 ZNF394Q53GI3 561 aa14.88□□□□□ -0.03
COL16A1-214ENST00000488128 RNASEH2BQ5TBB1 312 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms