RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 LUZP1Q86V48 1076 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 TCEAL8Q8IYN2 117 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 C12orf29Q8N999 325 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 KREMEN1Q96MU8 473 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 ASB2Q96Q27 587 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 SEPT5Q99719 369 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 B3GNT5Q9BYG0 378 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 ADAM7Q9H2U9 754 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 NDST4Q9H3R1 872 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 POMKQ9H5K3 350 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 SFXN1Q9H9B4 322 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 DZANK1Q9NVP4 752 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 CEP72Q9P209 647 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 INSL5Q9Y5Q6 135 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 ARHGEF37A1IGU5 675 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 CCDC130P13994 396 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 ATF6P18850 670 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 ELF1P32519 619 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 MRPS5P82675 430 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 TSPY1Q01534 308 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 SMAD4Q13485 552 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 CUL2Q13617 745 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 DDR2Q16832 855 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 WDR44Q5JSH3 913 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 LIN9Q5TKA1 542 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 TPGS2Q68CL5 300 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 PAQR9Q6ZVX9 377 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 GRASPQ7Z6J2 395 aaPredicted RBP18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 UBR7Q8N806 425 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 SUSD6Q92537 303 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 SMG7Q92540 1137 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 PCED1BQ96HM7 432 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 PRKD2Q9BZL6 878 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 IMPG2Q9BZV3 1241 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 ZNF518BQ9C0D4 1074 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
SHROOM1-205ENST00000488072 RNF225M0QZC1 329 aaPredicted RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 PMM2O15305 246 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 HOXB8P17481 243 aaPredicted RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 ACO1P21399 889 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 BDNFP23560 247 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 COPB1P53618 953 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 MTMR3Q13615 1198 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 FAM114A1Q8IWE2 563 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 DCP1BQ8IZD4 617 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 DNMT3BQ9UBC3 853 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-205ENST00000488072 P4HA2O15460 535 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 CILPO75339 1184 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 PNMA6AP0CW24 399 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 SRGAP2BP0DMP2 458 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 HAPLN1P10915 354 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 P4HA1P13674 534 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 GJA1P17302 382 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 EEF1GP26641 437 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 PON1P27169 355 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 PCSK1P29120 753 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 CYP27A1Q02318 531 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 INCA1Q0VD86 236 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 PPM1KQ8N3J5 372 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 B3GALNT2Q8NCR0 500 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 CCDC150Q8NCX0 1101 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 HDAC7Q8WUI4 952 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 TCEAL4Q96EI5 215 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 NT5C1BQ96P26 610 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 ZNF334Q9HCZ1 680 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 CD320Q9NPF0 282 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 PCDHB5Q9Y5E4 795 aa18.28■□□□□ 0.52
SHROOM1-205ENST00000488072 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 CCR2P41597 374 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 RAD23BP54727 409 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SMAD2Q15796 467 aaKnown RBP18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SLC5A9Q2M3M2 681 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 GBP6Q6ZN66 633 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SCN4BQ8IWT1 228 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SLC4A11Q8NBS3 891 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 CMASQ8NFW8 434 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 ITFG1Q8TB96 612 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 MYCBPAPQ8TBZ2 947 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 SPATA18Q8TC71 538 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 CYP3A43Q9HB55 503 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 PIDD1Q9HB75 910 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 UBE2TQ9NPD8 197 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 ACP6Q9NPH0 428 aa18.27■□□□□ 0.52
SHROOM1-205ENST00000488072 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms