RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SH3BP4Q9P0V3 963 aa5.15□□□□□ -1.59
CCDC66-221ENST00000487739 H0YIZ8 118 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 QSOX1O00391 747 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 SLC16A3O15427 465 aaKnown RBP5.14□□□□□ -1.59
CCDC66-221ENST00000487739 LATS1O95835 1130 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 AHSGP02765 367 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 PDHA1P08559 390 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 KELP23276 732 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 CERS1P27544 350 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 MAP2K6P52564 334 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 SSBP2P81877 361 aaPredicted RBP5.14□□□□□ -1.59
CCDC66-221ENST00000487739 BOP1Q14137 746 aaKnown RBP5.14□□□□□ -1.59
CCDC66-221ENST00000487739 PROSER3Q2NL68 480 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 SLC44A4Q53GD3 710 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 TMEM240Q5SV17 173 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 ZNF626Q68DY1 528 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 LAYNQ6UX15 382 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 WDR53Q7Z5U6 358 aaPredicted RBP5.14□□□□□ -1.59
CCDC66-221ENST00000487739 PPP1R3BQ86XI6 285 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 FANCBQ8NB91 859 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 BRIX1Q8TDN6 353 aaKnown RBP5.14□□□□□ -1.59
CCDC66-221ENST00000487739 REPS1Q96D71 796 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 SLC46A1Q96NT5 459 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 NRIP3Q9NQ35 241 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 PNPOQ9NVS9 261 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 HESX1Q9UBX0 185 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 SH2B3Q9UQQ2 575 aa5.14□□□□□ -1.59
CCDC66-221ENST00000487739 ONECUT2O95948 504 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 POU2F2P09086 479 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 ATXN1LP0C7T5 689 aaKnown RBP5.13□□□□□ -1.59
CCDC66-221ENST00000487739 EPHB2P29323 1055 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 ZNF134P52741 427 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 EEFSECP57772 596 aaKnown RBP5.13□□□□□ -1.59
CCDC66-221ENST00000487739 LOXL3P58215 753 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 LONRF3Q496Y0 759 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 CCDC157Q569K6 752 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 NEK8Q86SG6 692 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 TTYH3Q9C0H2 523 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 PCDHA1Q9Y5I3 950 aa5.13□□□□□ -1.59
CCDC66-221ENST00000487739 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 ZNF213O14771 459 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 IL33O95760 270 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 IL6RP08887 468 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 PPIFP30405 207 aaKnown RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 CYP2C18P33260 490 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 PXNP49023 591 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 CLCN2P51788 898 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 TUBA4AP68366 448 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 EXOSC9Q06265 439 aaKnown RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 TREML2Q5T2D2 321 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 EMC10Q5UCC4 262 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 PRAMEF17Q5VTA0 474 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 ZNF66Q6ZN08 573 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 MAVSQ7Z434 540 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-221ENST00000487739 DLL3Q9NYJ7 618 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 SERTAD3Q9UJW9 196 aa5.12□□□□□ -1.59
CCDC66-221ENST00000487739 PROB1E7EW31 1015 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 H3BUI4 141 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 SMIM22K7EJ46 135 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 PTGER1P34995 402 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 LIPAP38571 399 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 IQCB1Q15051 598 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 AMOTQ4VCS5 1084 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 CATIPQ7Z7H3 387 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCDC66-221ENST00000487739 ZNF366Q8N895 744 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 PCSK9Q8NBP7 692 aaKnown RBP5.11□□□□□ -1.59
CCDC66-221ENST00000487739 RPL36ALQ969Q0 106 aaKnown RBP5.11□□□□□ -1.59
CCDC66-221ENST00000487739 HSPBAP1Q96EW2 488 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 MOGAT1Q96PD6 335 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 PTDSS2Q9BVG9 487 aa5.11□□□□□ -1.59
CCDC66-221ENST00000487739 TISP43B9A030 160 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 PPP6CO00743 305 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 DCLK1O15075 740 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 DNAJB5O75953 348 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 MPGP29372 298 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 SOX8P57073 446 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 LILRA4P59901 499 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 NKX6-1P78426 367 aaPredicted RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 PLS1Q14651 629 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 ARHGAP40Q5TG30 622 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 YTHDF3Q7Z739 585 aaKnown RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 LRRC71Q8N4P6 559 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 MTFMTQ96DP5 389 aaKnown RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 SLC35A4Q96G79 324 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 GTPBP4Q9BZE4 634 aaKnown RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 GLOD4Q9HC38 313 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 SARS2Q9NP81 518 aaKnown RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 DUSP22Q9NRW4 184 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 CADPSQ9ULU8 1353 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 BTBD3Q9Y2F9 522 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 LUC7L2Q9Y383 392 aaKnown RBP5.1□□□□□ -1.59
CCDC66-221ENST00000487739 PLEKHM1Q9Y4G2 1056 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 COL4A3BPQ9Y5P4 624 aa5.1□□□□□ -1.59
CCDC66-221ENST00000487739 TP73O15350 636 aa5.09□□□□□ -1.59
CCDC66-221ENST00000487739 UNC5CO95185 931 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms