RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 SLC46A1Q96NT5 459 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 PNPOQ9NVS9 261 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 DLL3Q9NYJ7 618 aa4.7□□□□□ -1.66
RBM39-234ENST00000487604 FEZ2Q9UHY8 353 aaPredicted RBP4.7□□□□□ -1.66
RBM39-234ENST00000487604 DTNBO60941 627 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 DNAJB5O75953 348 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 JTBO76095 146 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 IL6RP08887 468 aaPredicted RBP4.69□□□□□ -1.66
RBM39-234ENST00000487604 PRR35P0CG20 571 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 LIPAP38571 399 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 EXOSC9Q06265 439 aaKnown RBP4.69□□□□□ -1.66
RBM39-234ENST00000487604 PROSER3Q2NL68 480 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 ICE2Q659A1 982 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 ZNF626Q68DY1 528 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 CEP85Q6P2H3 762 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 ZNF66Q6ZN08 573 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 CATIPQ7Z7H3 387 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
RBM39-234ENST00000487604 TBC1D5Q92609 795 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 FAM167AQ96KS9 214 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 PCDH12Q9NPG4 1184 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 SH3BP4Q9P0V3 963 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 HESX1Q9UBX0 185 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 SSX2IPQ9Y2D8 614 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 ZNF804BA4D1E1 1349 aa4.69□□□□□ -1.66
RBM39-234ENST00000487604 TISP43B9A030 160 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 H0YIZ8 118 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 SLC16A3O15427 465 aaKnown RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 HDCP19113 662 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 KELP23276 732 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 CYP2C18P33260 490 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 NKX6-1P78426 367 aaPredicted RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 PLS1Q14651 629 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 PGS1Q32NB8 556 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 LONRF3Q496Y0 759 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 SLC44A4Q53GD3 710 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 AARS2Q5JTZ9 985 aaKnown RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 TMEM240Q5SV17 173 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 EMC10Q5UCC4 262 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 SFRP4Q6FHJ7 346 aaPredicted RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 ANKRD16Q6P6B7 361 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 SLC29A4Q7RTT9 530 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 FANCBQ8NB91 859 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 PCSK9Q8NBP7 692 aaKnown RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 GTPBP4Q9BZE4 634 aaKnown RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 TTYH3Q9C0H2 523 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 SERTAD3Q9UJW9 196 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 LUC7L2Q9Y383 392 aaKnown RBP4.68□□□□□ -1.66
RBM39-234ENST00000487604 COL4A3BPQ9Y5P4 624 aa4.68□□□□□ -1.66
RBM39-234ENST00000487604 H3BUI4 141 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 TLR5O60602 858 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 IL33O95760 270 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 ITGB6P18564 788 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 C11orf87Q6NUJ2 197 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 HSPBAP1Q96EW2 488 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 MVB12AQ96EY5 273 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 PTDSS2Q9BVG9 487 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 SEMA4CQ9C0C4 833 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 BTBD3Q9Y2F9 522 aa4.67□□□□□ -1.66
RBM39-234ENST00000487604 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 PRRT4C9JH25 899 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 SMIM22K7EJ46 135 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 QSOX1O00391 747 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 TP73O15350 636 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 ATXN1LP0C7T5 689 aaKnown RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 MPGP29372 298 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 PPIFP30405 207 aaKnown RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 CLCN2P51788 898 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 EEFSECP57772 596 aaKnown RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 LILRA4P59901 499 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 IQCB1Q15051 598 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 BRDTQ58F21 947 aaPredicted RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 PCID2Q5JVF3 399 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 PRAMEF17Q5VTA0 474 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 WDR53Q7Z5U6 358 aaPredicted RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 NEK8Q86SG6 692 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 QTRT1Q9BXR0 403 aaKnown RBP4.66□□□□□ -1.66
RBM39-234ENST00000487604 PCDHA6Q9UN73 950 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 SH2B3Q9UQQ2 575 aa4.66□□□□□ -1.66
RBM39-234ENST00000487604 UNC5CO95185 931 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 ONECUT2O95948 504 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 CYP2D6P10635 497 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 AKAP5P24588 427 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 CERS1P27544 350 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 PXNP49023 591 aaPredicted RBP4.65□□□□□ -1.67
RBM39-234ENST00000487604 SOX8P57073 446 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 LOXL3P58215 753 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 TUBA4AP68366 448 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
RBM39-234ENST00000487604 SUPT20HL1Q3ZLR7 823 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 AMOTQ4VCS5 1084 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 CCDC157Q569K6 752 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 CEP78Q5JTW2 689 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 ARHGAP40Q5TG30 622 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 LAYNQ6UX15 382 aa4.65□□□□□ -1.67
RBM39-234ENST00000487604 YTHDF3Q7Z739 585 aaKnown RBP4.65□□□□□ -1.67
RBM39-234ENST00000487604 CELF5Q8N6W0 485 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms