RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	TDRP	Q86YL5	185 aa		27.52	■■■□□ 2
HLA-C-208	ENST00000487245	IFNLR1	Q8IU57	520 aa	Predicted RBP	27.52	■■■□□ 2
HLA-C-208	ENST00000487245	CFAP57	Q96MR6	1250 aa		27.52	■■■□□ 2
HLA-C-208	ENST00000487245	MCEE	Q96PE7	176 aa		27.52	■■■□□ 2
HLA-C-208	ENST00000487245	DNAJC17	Q9NVM6	304 aa	Known RBP	27.52	■■■□□ 2
HLA-C-208	ENST00000487245	CFAP73	A6NFT4	308 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	TCP11X1	B4DZS4	312 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	GJB6	O95452	261 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	KRT1	P04264	644 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	MCF2	P10911	925 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	ZNF252P-AS1	Q0IIN9	211 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	SNCB	Q16143	134 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	P3H1	Q32P28	736 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	ZNF394	Q53GI3	561 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	PPP1R21	Q6ZMI0	780 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	ARHGEF18	Q6ZSZ5	1173 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	WDTC1	Q8N5D0	677 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	ALLC	Q8N6M5	410 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	MAGEB18	Q96M61	343 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	PWWP2A	Q96N64	755 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	BCO2	Q9BYV7	579 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	PNMA3	Q9UL41	463 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	B4GALT5	O43286	388 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	MGRN1	O60291	552 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	SUN1	O94901	812 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	CETP	P11597	493 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	MPP2	Q14168	576 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	SPOCD1	Q6ZMY3	1216 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	GSTA5	Q7RTV2	222 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	CYP4X1	Q8N118	509 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	TFAP2B	Q92481	460 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	MAML1	Q92585	1016 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	RBM15	Q96T37	977 aa	Known RBP eCLIP	27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	KCNK9	Q9NPC2	374 aa		27.51	■■□□□ 1.99
HLA-C-208	ENST00000487245	ATIC	P31939	592 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	LRRC14	Q15048	493 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	ZFYVE27	Q5T4F4	411 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	MFSD7	Q6UXD7	560 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	SCARA5	Q6ZMJ2	495 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	ILDR2	Q71H61	639 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	NKD2	Q969F2	451 aa	Predicted RBP	27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	UBN1	Q9NPG3	1134 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	WDR35	Q9P2L0	1181 aa		27.5	■■□□□ 1.99
HLA-C-208	ENST00000487245	SLC18A1	P54219	525 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	OSTN	P61366	133 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	SNAPC2	Q13487	334 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	GALNTL6	Q49A17	601 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	POLN	Q7Z5Q5	900 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	GBP7	Q8N8V2	638 aa	Predicted RBP	27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	PPCS	Q9HAB8	311 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	PDGFC	Q9NRA1	345 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	FGFR1OP2	Q9NVK5	253 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	NXF1	Q9UBU9	619 aa	Known RBP	27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	DNPEP	Q9ULA0	475 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	IVNS1ABP	Q9Y6Y0	642 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	ANK1	P16157	1881 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	ATP2C2	O75185	946 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	GJB1	P08034	283 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	CCNA1	P78396	465 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	ARHGAP1	Q07960	439 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	MORF4L2	Q15014	288 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	ARMCX2	Q7L311	632 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	MGARP	Q8TDB4	240 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	C9orf72	Q96LT7	481 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	FAM118B	Q9BPY3	351 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	RNPEP	Q9H4A4	650 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	ASB7	Q9H672	318 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	CYP3A43	Q9HB55	503 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	NKIRAS1	Q9NYS0	192 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	PRKAG3	Q9UGI9	489 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	TPX2	Q9ULW0	747 aa	Known RBP	27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	COL1A2	P08123	1366 aa		27.49	■■□□□ 1.99
HLA-C-208	ENST00000487245	hCG_1818297	A0A087WSY0	165 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	SIGLEC16	A6NMB1	481 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	GH1	P01241	217 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	ITGAV	P06756	1048 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	KRT19	P08727	400 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	CXCL8	P10145	99 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	VCP	P55072	806 aa	Known RBP	27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	GSC	P56915	257 aa	Predicted RBP	27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	RASA2	Q15283	850 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	OASL	Q15646	514 aa	Known RBP	27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	ATP13A4	Q4VNC1	1196 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	DENND1B	Q6P3S1	775 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	MINDY3	Q9H8M7	445 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	VTA1	Q9NP79	307 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	POLI	Q9UNA4	740 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	EFR3B	Q9Y2G0	817 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245	ARL2BP	Q9Y2Y0	163 aa		27.48	■■□□□ 1.99
HLA-C-208	ENST00000487245		F8VP50	259 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	GPR25	O00155	361 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	STAG3L1	P0CL83	205 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	P4HA1	P13674	534 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	INSRR	P14616	1297 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	CD19	P15391	556 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	TMEM63B	Q5T3F8	832 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	CEP120	Q8N960	986 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	ANKRD42	Q8N9B4	389 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	FNIP1	Q8TF40	1166 aa		27.47	■■□□□ 1.99
HLA-C-208	ENST00000487245	GRAMD1A	Q96CP6	724 aa		27.47	■■□□□ 1.99

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