RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 ASCC2Q9H1I8 757 aaPredicted RBP13.96□□□□□ -0.18
HDLBP-241ENST00000487169 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.18
HDLBP-241ENST00000487169 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.18
HDLBP-241ENST00000487169 PSMD3O43242 534 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 SLITRK3O94933 977 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 THP07101 528 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 GZMAP12544 262 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 AKT1P31749 480 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 ITGA8P53708 1063 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 RHBDL3P58872 404 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-241ENST00000487169 GPC2Q8N158 579 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 RPRD1AQ96P16 312 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-241ENST00000487169 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 CISHQ9NSE2 258 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 FZD1Q9UP38 647 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
HDLBP-241ENST00000487169 CYB561D2O14569 222 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 TMCC1O94876 653 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 PTGER2P43116 358 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 TMEM259Q4ZIN3 620 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 REXO1L1PQ8IX06 675 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-241ENST00000487169 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 WWP1Q9H0M0 922 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 TMEM150BA6NC51 233 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 PMPCBO75439 489 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 CXCL8P10145 99 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
HDLBP-241ENST00000487169 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■□□ 17
HDLBP-241ENST00000487169 FAXCQ5TGI0 409 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 RUBCNQ92622 972 aa13.95□□□□□ -0.18
HDLBP-241ENST00000487169 HIST1H2AGP0C0S8 130 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ZNF286BP0CG31 522 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 HIST1H2ADP20671 130 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CYP24A1Q07973 514 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 HIST1H2AHQ96KK5 128 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PNMA5Q96PV4 448 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 HIST1H2AJQ99878 128 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ZSWIM1Q9BR11 485 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 H2AFJQ9BTM1 129 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PACSIN1Q9BY11 444 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 NRXN3Q9Y4C0 1643 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 URB1O60287 2271 aaKnown RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CCDC22O60826 627 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 POLBP06746 335 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 SPRP35270 261 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ETFBP38117 255 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 COILP38432 576 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 MYBPC2Q14324 1141 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PCDHGB4Q9UN71 923 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 RNF103-CHMP3A0A140T963 221 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 PDAP1Q13442 181 aaKnown RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 DACT3Q96B18 629 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 FUT8Q9BYC5 575 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CASS4Q9NQ75 786 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 C20orf96Q9NUD7 363 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ARHGAP20Q9P2F6 1191 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 MARCOQ9UEW3 520 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ZNF263O14978 683 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 KRT4P19013 534 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 TRAPPC12Q8WVT3 735 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-241ENST00000487169 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
HDLBP-241ENST00000487169 F8VZ95 297 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 EML1O00423 815 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
HDLBP-241ENST00000487169 MAP1BP46821 2468 aaKnown RBP13.93□□□□□ -0.18
HDLBP-241ENST00000487169 SERPINB9P50453 376 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 PTPN11Q06124 597 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-241ENST00000487169 FAM131BQ86XD5 332 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 VPS33BQ9H267 617 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 STARD7Q9NQZ5 370 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 LRRC4BQ9NT99 713 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 SCOCQ9UIL1 159 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 SMAPO00193 183 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 SPAG6O75602 509 aa13.93□□□□□ -0.18
HDLBP-241ENST00000487169 SNRPAP09012 282 aaKnown RBP13.93□□□□□ -0.18
HDLBP-241ENST00000487169 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms