RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ZNF785A8K8V0 405 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 PYCARD-AS1I3L0S3 204 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 UNC5CO95185 931 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 RARBP10826 455 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 PDIA3P30101 505 aaKnown RBP4.75□□□□□ -1.65
PTCD3-216ENST00000487043 SLC6A4P31645 630 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 MAPK9P45984 424 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 CARSP49589 748 aaKnown RBP4.75□□□□□ -1.65
PTCD3-216ENST00000487043 MRPL49Q13405 166 aaKnown RBP4.75□□□□□ -1.65
PTCD3-216ENST00000487043 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 RNF151Q2KHN1 245 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF568Q3ZCX4 644 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 NT5DC1Q5TFE4 455 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 ANKS6Q68DC2 871 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 ADGRE4PQ86SQ3 457 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 AOPEPQ8N6M6 819 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 DNAJC5GQ8N7S2 189 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 RABGGTAQ92696 567 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 TBC1D20Q96BZ9 403 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 LRRC46Q96FV0 321 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 HEPHQ9BQS7 1158 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 NDC1Q9BTX1 674 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 STK31Q9BXU1 1019 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 STK33Q9BYT3 514 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 ENKD1Q9H0I2 346 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 GSTO2Q9H4Y5 243 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 IL23AQ9NPF7 189 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 OBP2BQ9NPH6 170 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 SAGE1Q9NXZ1 904 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 LRFN1Q9P244 771 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 ANAPC4Q9UJX5 808 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 TRPM2O94759 1503 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 CAMSAP1Q5T5Y3 1602 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 SPHKAPQ2M3C7 1700 aa4.75□□□□□ -1.65
PTCD3-216ENST00000487043 NOS1P29475 1434 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 CNTLNQ9NXG0 1405 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 UBE2QL1A1L167 161 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 MYO1CO00159 1063 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 RASSF9O75901 435 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 STC2O76061 302 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 GRPP07492 148 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 SNRPA1P09661 255 aaKnown RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF135P52742 658 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 UCP3P55916 312 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 CAP1Q01518 475 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 FAM214AQ32MH5 1076 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 ZACNQ401N2 412 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 UTP14CQ5TAP6 766 aaKnown RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 DCAF12L1Q5VU92 463 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 FBXO38Q6PIJ6 1188 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 ZNF365Q70YC5 407 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 XYLT1Q86Y38 959 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 CARFQ8N187 725 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 FANCBQ8NB91 859 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 NLGN4YQ8NFZ3 816 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 OR56A3Q8NH54 315 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 ADAMTS17Q8TE56 1095 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 RMDN3Q96TC7 470 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 PAGR1Q9BTK6 254 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 ISCA1Q9BUE6 129 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 CHST8Q9H2A9 424 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 C12orf65Q9H3J6 166 aaKnown RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 A1CFQ9NQ94 594 aaKnown RBP4.74□□□□□ -1.65
PTCD3-216ENST00000487043 GRHPRQ9UBQ7 328 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 GPR52Q9Y2T5 361 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 TMX2Q9Y320 296 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 SLC4A7Q9Y6M7 1214 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 NEURL4Q96JN8 1562 aa4.74□□□□□ -1.65
PTCD3-216ENST00000487043 PNPLA7Q6ZV29 1317 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SPATA31E1Q6ZUB1 1445 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 A0A1W2PRX2 142 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SH3D21A4FU49 640 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 MBD3L4A6NDZ8 208 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 MBD3L3A6NE82 208 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 GOLGA6L3A6NEY3 463 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 LGALS16A8MUM7 142 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HMGB1P1B2RPK0 211 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 M0QYG6 137 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 M0R3H8 397 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 PODXLO00592 558 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HNRNPDLO14979 420 aaKnown RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 PJA2O43164 708 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HOXA3O43365 443 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SLC26A4O43511 780 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 B4GALT4O60513 344 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 DNAJB5O75953 348 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HAUS5O94927 633 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 NDST3O95803 873 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 POMCP01189 267 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 AMHP03971 560 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 ALAS1P13196 640 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 HSD3B1P14060 373 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 IL1R1P14778 569 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 SLC11A2P49281 568 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 CLRN1P58418 232 aa4.73□□□□□ -1.65
PTCD3-216ENST00000487043 POU6F2P78424 691 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms