RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 DDR2Q16832 855 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 TMEM150AQ86TG1 271 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 HSCBQ8IWL3 235 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 DCLK2Q8N568 766 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 SUMF1Q8NBK3 374 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 ATRIPQ8WXE1 791 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 ANKRD36BP1Q96IX9 119 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 C7orf25Q9BPX7 421 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 HINFPQ9BQA5 517 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 CHRDQ9H2X0 955 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 GTSE1Q9NYZ3 720 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 MAGED2Q9UNF1 606 aaPredicted RBP26.38■■□□□ 1.81
LIME1-206ENST00000487026 KIAA0391O15091 583 aaKnown RBP26.37■■□□□ 1.81
LIME1-206ENST00000487026 F13A1P00488 732 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 CYP2F1P24903 491 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 MYL7Q01449 175 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 NFE2Q16621 373 aaPredicted RBP26.37■■□□□ 1.81
LIME1-206ENST00000487026 SOWAHAQ2M3V2 549 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 INTS6LQ5JSJ4 861 aaKnown RBP26.37■■□□□ 1.81
LIME1-206ENST00000487026 EPM2AIP1Q7L775 607 aaPredicted RBP26.37■■□□□ 1.81
LIME1-206ENST00000487026 TMEM86AQ8N2M4 240 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 RDH13Q8NBN7 331 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 ZNF507Q8TCN5 953 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 BLZF1Q9H2G9 400 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 PCDHA7Q9UN72 937 aa26.37■■□□□ 1.81
LIME1-206ENST00000487026 F11P03951 625 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 CHRNB1P11230 501 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 NLRP12P59046 1061 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 TNK2Q07912 1038 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 PKP1Q13835 747 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 ARHGAP29Q52LW3 1261 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 FAM26FQ5R3K3 315 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 NELFCDQ8IXH7 590 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 KIAA2013Q8IYS2 634 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 ADGRF2Q8IZF7 708 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 MAB21L3Q8N8X9 362 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 HPDLQ96IR7 371 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 PKMYT1Q99640 499 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 PRMT8Q9NR22 394 aaPredicted RBP26.36■■□□□ 1.81
LIME1-206ENST00000487026 ZSCAN32Q9NX65 697 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 OBP2AQ9NY56 170 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 R3HCC1Q9Y3T6 440 aaKnown RBP26.36■■□□□ 1.81
LIME1-206ENST00000487026 PCDHGA2Q9Y5H1 932 aa26.36■■□□□ 1.81
LIME1-206ENST00000487026 CLIC2O15247 247 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 EIF3DO15371 548 aaKnown RBP eCLIP26.35■■□□□ 1.81
LIME1-206ENST00000487026 TGFB1I1O43294 461 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 TNNC2P02585 160 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 WEE1P30291 646 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 ME1P48163 572 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 MLLT6P55198 1093 aaPredicted RBP26.35■■□□□ 1.81
LIME1-206ENST00000487026 MYO1EQ12965 1108 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 DUOXA2Q1HG44 320 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 TXNDC8Q6A555 127 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 CNNM4Q6P4Q7 775 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 TXNDC11Q6PKC3 985 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 CMTM8Q8IZV2 173 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 TOP6BLQ8N6T0 577 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 ZBTB44Q8NCP5 570 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 BPIFB1Q8TDL5 484 aa26.35■■□□□ 1.81
LIME1-206ENST00000487026 C8orf33Q9H7E9 229 aaPredicted RBP26.35■■□□□ 1.81
LIME1-206ENST00000487026 RBM12Q9NTZ6 932 aaKnown RBP26.35■■□□□ 1.81
LIME1-206ENST00000487026 GPR179Q6PRD1 2367 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 MYBPHLA2RUH7 354 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 SPECC1L-ADORA2AF8WAN1 911 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 GABRDO14764 452 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 ATP2C2O75185 946 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 AFMP43652 599 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 CYP2J2P51589 502 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 SURF1Q15526 300 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 WDR44Q5JSH3 913 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 CELF5Q8N6W0 485 aaKnown RBP26.34■■□□□ 1.81
LIME1-206ENST00000487026 LEO1Q8WVC0 666 aaPredicted RBP26.34■■□□□ 1.81
LIME1-206ENST00000487026 RUBCNQ92622 972 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 NELL1Q92832 810 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 AGPAT3Q9NRZ7 376 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 CCL26Q9Y258 94 aa26.34■■□□□ 1.81
LIME1-206ENST00000487026 NUP210Q8TEM1 1887 aaPredicted RBP26.34■■□□□ 1.81
LIME1-206ENST00000487026 OTOGLQ3ZCN5 2332 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 CSH1P0DML2 217 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 CSH2P0DML3 217 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 LMO2P25791 158 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 LHX1P48742 406 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 GAS6Q14393 721 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 UNC13DQ70J99 1090 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 SCFD1Q8WVM8 642 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 KIAA1586Q9HCI6 787 aa26.33■■□□□ 1.81
LIME1-206ENST00000487026 DLATP10515 647 aaKnown RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 CTHP32929 405 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 AVPR1AP37288 418 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 ID4P47928 161 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 RPL10AP62906 217 aaKnown RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 EHHADHQ08426 723 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 CUL4BQ13620 913 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 SNRNP35Q16560 246 aaKnown RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 RESP18Q5W5W9 173 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 TRAPPC11Q7Z392 1133 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 SPATA2LQ8IUW3 424 aaPredicted RBP26.32■■□□□ 1.8
LIME1-206ENST00000487026 SCN4BQ8IWT1 228 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 GRAMD1CQ8IYS0 662 aa26.32■■□□□ 1.8
LIME1-206ENST00000487026 KBTBD7Q8WVZ9 684 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms