RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 EOMESO95936 686 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CTSHP09668 335 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CHRNA3P32297 505 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CETN2P41208 172 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CDK7P50613 346 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 DNA2P51530 1060 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 COPS2P61201 443 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 FAM189BP81408 668 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 PDCLQ13371 301 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 NNTQ13423 1086 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 DHX34Q14147 1143 aaKnown RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 PTPN20Q4JDL3 420 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 GLRA4Q5JXX5 417 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 DCUN1D2Q6PH85 259 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 AGMOQ6ZNB7 445 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 ARCQ7LC44 396 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 POLNQ7Z5Q5 900 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 TMEM110Q86TL2 294 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 XYLT1Q86Y38 959 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 C12orf50Q8NA57 414 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 EXD1Q8NHP7 514 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 RSPH1Q8WYR4 309 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 UROC1Q96N76 676 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 FTHL17Q9BXU8 183 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CXCL16Q9H2A7 254 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-207ENST00000486868 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 HOMER3Q9NSC5 361 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 EHD2Q9NZN4 543 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 CITO14578 2027 aa12.3□□□□□ -0.44
PRKCB-207ENST00000486868 TMEM110-MUSTN1A8MSY1 372 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 KBTBD13C9JR72 458 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 M0QYV0 167 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 DNM1LO00429 736 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 MAP2K7O14733 419 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 KRT3P12035 628 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 CKBP12277 381 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 CD52P31358 61 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 PTPN7P35236 360 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ACADSBP45954 432 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 LHX1P48742 406 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 FNTAP49354 379 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 DRG2P55039 364 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SOX4Q06945 474 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 GRIK3Q13003 919 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 CUL1Q13616 776 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF618Q5T7W0 954 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 HDXQ7Z353 690 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ANKRD52Q8NB46 1076 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 OR6B3Q8NGW1 331 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SLC35F5Q8WV83 523 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 KBTBD7Q8WVZ9 684 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 HSFY1Q96LI6 401 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 KRT12Q99456 494 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 VIPAS39Q9H9C1 493 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 RSAD1Q9HA92 442 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 RGS18Q9NS28 235 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ZNF446Q9NWS9 450 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 SMARCAL1Q9NZC9 954 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 HESX1Q9UBX0 185 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 PCYOX1Q9UHG3 505 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 DMGDHQ9UI17 866 aaKnown RBP12.29□□□□□ -0.44
PRKCB-207ENST00000486868 TSPAN16Q9UKR8 245 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 EFR3BQ9Y2G0 817 aa12.29□□□□□ -0.44
PRKCB-207ENST00000486868 ARL5CA6NH57 179 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 A8MXQ7 604 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 SPTLC1O15269 473 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PHF2O75151 1096 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 ERBB2P04626 1255 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PFKMP08237 780 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 GHRP10912 638 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PYGMP11217 842 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 YY1P25490 414 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 GBP1P32455 592 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 BCAT1P54687 386 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PSMC1P62191 440 aaKnown RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 BFSP2Q13515 415 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 RCOR2Q8IZ40 523 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 ADGRF2Q8IZF7 708 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 SLCO2A1Q92959 643 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms