RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
HMGN1-216ENST00000486741 DNAJB3Q8WWF6 145 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 MAML1Q92585 1016 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 GBA2Q9HCG7 927 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-216ENST00000486741 TIMM13Q9Y5L4 95 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-216ENST00000486741 GLI3P10071 1580 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 GAS2O43903 313 aaKnown RBP13.89□□□□□ -0.19
HMGN1-216ENST00000486741 CDH16O75309 829 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 AGTP01019 485 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 LGALS2P05162 132 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 GPD1P21695 349 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-216ENST00000486741 FBXW10Q5XX13 1052 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 ZPBP2Q6X784 338 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 NSMCE1Q8WV22 266 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 E2F8A0AVK6 867 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 APOL1O14791 398 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 MAGEA9P43362 315 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 JAM2P57087 298 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 GRIK4Q16099 956 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 ZNF484Q5JVG2 852 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 PID1Q7Z2X4 250 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 DCLK2Q8N568 766 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
HMGN1-216ENST00000486741 SHBGP04278 402 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 ETS1P14921 441 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 SEPT6Q14141 434 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 HELQQ8TDG4 1101 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 LBHD1Q9BQE6 289 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-216ENST00000486741 DNPEPQ9ULA0 475 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 MYH8P13535 1937 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-216ENST00000486741 GTF2A2P52657 109 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 BEX3Q00994 111 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 DENND1BQ6P3S1 775 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 SCUBE3Q8IX30 993 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 RNF139Q8WU17 664 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 RAPGEF5Q92565 580 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 CCDC88AQ3V6T2 1871 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 ADGRA3Q8IWK6 1321 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 COPEO14579 308 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
HMGN1-216ENST00000486741 CLNS1AP54105 237 aaKnown RBP13.88□□□□□ -0.19
HMGN1-216ENST00000486741 SPOCD1Q6ZMY3 1216 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 ZNF560Q96MR9 790 aa13.88□□□□□ -0.19
HMGN1-216ENST00000486741 IQANK1A0A1B0GTG1 560 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RARGP13631 454 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RFC1P35251 1148 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-216ENST00000486741 SULT1E1P49888 294 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 ERFP50548 548 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TFDP3Q5H9I0 405 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 FAM182AQ5T1J6 154 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 ICE2Q659A1 982 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 NXNQ6DKJ4 435 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 MYCBPAPQ8TBZ2 947 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TEPSINQ96N21 525 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 PLCH1Q4KWH8 1693 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RPSAP08865 295 aaKnown RBP13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TMPRSS15P98073 1019 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 STAT4Q14765 748 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 AGBL2Q5U5Z8 902 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 FAM131BQ86XD5 332 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TTC25Q96NG3 672 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 CDT1Q9H211 546 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RNPEPQ9H4A4 650 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TSPAN16Q9UKR8 245 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 STAP1Q9ULZ2 295 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 FIS1Q9Y3D6 152 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 COL16A1Q07092 1604 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-216ENST00000486741 ARHGAP42A6NI28 874 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-216ENST00000486741 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 KRT37O76014 449 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 MAMLD1Q13495 774 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 KDM7AQ6ZMT4 941 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 RPAINQ86UA6 219 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 SEC16BQ96JE7 1060 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 DCLK3Q9C098 648 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 NFASCO94856 1347 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 ATP9BO43861 1147 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 TAS2R40P59535 323 aa13.87□□□□□ -0.19
HMGN1-216ENST00000486741 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms