RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 DPEP3Q9H4B8 488 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 ACP6Q9NPH0 428 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 DDX43Q9NXZ2 648 aaKnown RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 DSEQ9UL01 958 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 BARX2Q9UMQ3 279 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-229ENST00000486665 DAAM1Q9Y4D1 1078 aa13.63□□□□□ -0.23
HDAC6-229ENST00000486665 ARHGEF37A1IGU5 675 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 LRRC53A6NM62 1247 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 A8MXQ7 604 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 CYP26A1O43174 497 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 DCXO43602 365 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 LILRB3O75022 631 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ATP2C2O75185 946 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 GFPT2O94808 682 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 KRT5P13647 590 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 CLCN1P35523 988 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 KRT9P35527 623 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 SOX5P35711 763 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 STAT1P42224 750 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 LHX1P48742 406 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ZNF132P52740 706 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ERVFC1P60507 584 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 YWHAEP62258 255 aaKnown RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ZBED6P86452 979 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 DSG1Q02413 1049 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 TRIM14Q14142 442 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 E4F1Q66K89 784 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ADGRD2Q7Z7M1 963 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ADHFE1Q8IWW8 467 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 SLC4A11Q8NBS3 891 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 OR10T2Q8NGX3 314 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 AUTS2Q8WXX7 1259 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 IQCDQ96DY2 449 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 SPAG5Q96R06 1193 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 ZBP1Q9H171 429 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 IGFLR1Q9H665 355 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 LUC7L2Q9Y383 392 aaKnown RBP13.62□□□□□ -0.23
HDAC6-229ENST00000486665 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 TECTAO75443 2155 aa13.62□□□□□ -0.23
HDAC6-229ENST00000486665 AKR1B15C9JRZ8 316 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-229ENST00000486665 C2CD2LO14523 706 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ADAM12O43184 909 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 MBTPS2O43462 519 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 MFAP3LO75121 409 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ALADP13716 330 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 CDR1P51861 262 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ARID5AQ03989 594 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ARID5BQ14865 1188 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 SMAD2Q15796 467 aaKnown RBP13.61□□□□□ -0.23
HDAC6-229ENST00000486665 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 IRF2BP2Q7Z5L9 587 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ACOT1Q86TX2 421 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 THEM5Q8N1Q8 247 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 TMEM176AQ96HP8 235 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 C11orf84Q9BUA3 381 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-229ENST00000486665 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 FAM124BQ9H5Z6 455 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-229ENST00000486665 IMPACTQ9P2X3 320 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
HDAC6-229ENST00000486665 MYO6Q9UM54 1294 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 LZTS1Q9Y250 596 aa13.61□□□□□ -0.23
HDAC6-229ENST00000486665 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CXCL14O95715 111 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 TPM1P09493 284 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CTSAP10619 480 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 SKILP12757 684 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
HDAC6-229ENST00000486665 RPL17P18621 184 aaKnown RBP13.6□□□□□ -0.23
HDAC6-229ENST00000486665 GLUD2P49448 558 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PSMD5Q16401 504 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 HFE2Q6ZVN8 426 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 TTC39CQ8N584 583 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 C12orf29Q8N999 325 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 ZNF397Q8NF99 534 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-229ENST00000486665 OR8K1Q8NGG5 319 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 TFAP2BQ92481 460 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PDLIM2Q96JY6 352 aa13.6□□□□□ -0.23
HDAC6-229ENST00000486665 HEXIM2Q96MH2 286 aaKnown RBP13.6□□□□□ -0.23
HDAC6-229ENST00000486665 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms