RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 DMXL1Q9Y485 3027 aa7.45□□□□□ -1.22
HDAC3-209ENST00000486618 CNOT1A5YKK6 2376 aaKnown RBP7.45□□□□□ -1.22
HDAC3-209ENST00000486618 DOCK6Q96HP0 2047 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 KANSL1LA0AUZ9 987 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ANHXE9PGG2 379 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 NRP1O14786 923 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 TEX28O15482 410 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 DYRK3O43781 588 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 GAS2O43903 313 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF862O60290 1169 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 RFPL2O75678 378 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 DDHD2O94830 711 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ABL1P00519 1130 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 GSPT1P15170 499 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 PAX7P23759 505 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 OAS2P29728 719 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 GLUD2P49448 558 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 PRKCQQ04759 706 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 HTR4Q13639 388 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ST3GAL2Q16842 350 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 DNAJC21Q5F1R6 531 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 XKR3Q5GH77 459 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 WDR45BQ5MNZ6 344 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 CPLX2Q6PUV4 134 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 RSPO2Q6UXX9 243 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 MRPL10Q7Z7H8 261 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 GLYCTKQ8IVS8 523 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 CNNM3Q8NE01 707 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 SYAP1Q96A49 352 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 VMP1Q96GC9 406 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 SRPK1Q96SB4 655 aaKnown RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 NELL2Q99435 816 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 RIT2Q99578 217 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 JPH2Q9BR39 696 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 OSBPL6Q9BZF3 934 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 NT5C3AQ9H0P0 336 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 RSAD1Q9HA92 442 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 RXFP1Q9HBX9 757 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 UBN1Q9NPG3 1134 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ZDHHC7Q9NXF8 308 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 ABI2Q9NYB9 513 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 SUCLA2Q9P2R7 463 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-209ENST00000486618 SUN2Q9UH99 717 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 TRIM33Q9UPN9 1127 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 PCDHB2Q9Y5E7 798 aa7.44□□□□□ -1.22
HDAC3-209ENST00000486618 F5P12259 2224 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CHD8Q9HCK8 2581 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 DMDP11532 3685 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MYH15Q9Y2K3 1946 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ESYT2A0FGR8 921 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MEIS3P2A8K0S8 358 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 PRSS47A8MTI9 375 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 NCAM2O15394 837 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ZBTB43O43298 467 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 TBC1D4O60343 1298 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 GAS7O60861 476 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 PAPLNO95428 1278 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 GLULP15104 373 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 GNA11P29992 359 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CIITAP33076 1130 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 OR1G1P47890 313 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MASP1P48740 699 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 PFKPQ01813 784 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CREMQ03060 361 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CSTF1Q05048 431 aaKnown RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 SERINC3Q13530 473 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MTERF2Q49AM1 385 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF394Q53GI3 561 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 PPP4R3AQ6IN85 833 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 APOA5Q6Q788 366 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 AGMOQ6ZNB7 445 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MTSS1LQ765P7 747 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF354CQ86Y25 554 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 PALB2Q86YC2 1186 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 RHPN2Q8IUC4 686 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 GPR65Q8IYL9 337 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 SAMD14Q8IZD0 417 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 MAML2Q8IZL2 1156 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 RDM1Q8NG50 284 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 EXOC6Q8TAG9 804 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ZNF707Q96C28 371 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CDK5RAP3Q96JB5 506 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CHAMP1Q96JM3 812 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 SERINC2Q96SA4 455 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 COLEC11Q9BWP8 271 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 TEKT3Q9BXF9 490 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 FAM126AQ9BYI3 521 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 LRRC2Q9BYS8 371 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 XPO4Q9C0E2 1151 aaKnown RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 FANCLQ9NW38 375 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 ZSCAN32Q9NX65 697 aa7.43□□□□□ -1.22
HDAC3-209ENST00000486618 CGNQ9P2M7 1197 aaKnown RBP7.43□□□□□ -1.22
HDAC3-209ENST00000486618 XPO7Q9UIA9 1087 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms