RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TASP1Q9H6P5 420 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
XRN1-212ENST00000486211 COL5A1P20908 1838 aaPredicted RBP9.05□□□□□ -0.96
XRN1-212ENST00000486211 HELZP42694 1942 aaKnown RBP9.05□□□□□ -0.96
XRN1-212ENST00000486211 COL6A6A6NMZ7 2263 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 N4BP3O15049 544 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 DKC1O60832 514 aaKnown RBP eCLIP9.05□□□□□ -0.96
XRN1-212ENST00000486211 EDN1P05305 212 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 GABRR2P28476 465 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 GNA11P29992 359 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 EPHB3P54753 998 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 CYP4F8P98187 520 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 CRY1Q16526 586 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 MAP7D1Q3KQU3 841 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 XKR9Q5GH70 373 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 ZNF280DQ6N043 979 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 DNAJB7Q7Z6W7 309 aaPredicted RBP9.05□□□□□ -0.96
XRN1-212ENST00000486211 SMC5Q8IY18 1101 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 CEP76Q8TAP6 659 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 TBCKQ8TEA7 893 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 PSMG2Q969U7 264 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 FCRL3Q96P31 734 aaPredicted RBP9.05□□□□□ -0.96
XRN1-212ENST00000486211 SLC46A2Q9BY10 475 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 CCL26Q9Y258 94 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 GDAQ9Y2T3 454 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 PCDHB9Q9Y5E1 797 aa9.05□□□□□ -0.96
XRN1-212ENST00000486211 TRIP11Q15643 1979 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PIEZO2Q9H5I5 2752 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 NID2Q14112 1375 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 SMIM28A0A1B0GU29 152 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CAPN8A6NHC0 703 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PODXLO00592 558 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CAPN9O14815 690 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 SGSM2O43147 1006 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 ZBTB43O43298 467 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CPB1P15086 417 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CHMLP26374 656 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 AMPD2Q01433 879 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 DUSP4Q13115 394 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PLD1Q13393 1074 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 ARHGAP15Q53QZ3 475 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 EEF1DP3Q658K8 133 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CDCA2Q69YH5 1023 aaPredicted RBP9.04□□□□□ -0.96
XRN1-212ENST00000486211 SYNE3Q6ZMZ3 975 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 OTUD6AQ7L8S5 288 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 CHD1LQ86WJ1 897 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 BAHD1Q8TBE0 780 aaPredicted RBP9.04□□□□□ -0.96
XRN1-212ENST00000486211 CCDC12Q8WUD4 166 aaPredicted RBP9.04□□□□□ -0.96
XRN1-212ENST00000486211 USP13Q92995 863 aaPredicted RBP9.04□□□□□ -0.96
XRN1-212ENST00000486211 CD101Q93033 1021 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 SUSD3Q96L08 255 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 TBC1D32Q96NH3 1257 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PGLYRP2Q96PD5 576 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PRMT7Q9NVM4 692 aaPredicted RBP9.04□□□□□ -0.96
XRN1-212ENST00000486211 RGL1Q9NZL6 768 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 USP20Q9Y2K6 914 aa9.04□□□□□ -0.96
XRN1-212ENST00000486211 TEX51A0A1B0GUA7 166 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 GOLGA8AA7E2F4 631 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 GOLGA8BA8MQT2 603 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 K7EQS6 105 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 SLC37A4O43826 429 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 WISP1O95388 367 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 FGF19O95750 216 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 OR4Q2P0C623 313 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 GSPT1P15170 499 aaKnown RBP9.03□□□□□ -0.96
XRN1-212ENST00000486211 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
XRN1-212ENST00000486211 EIF2S3P41091 472 aaKnown RBP9.03□□□□□ -0.96
XRN1-212ENST00000486211 PSMD2Q13200 908 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 XKR4Q5GH76 650 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 CENPPQ6IPU0 288 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 LYPD8Q6UX82 237 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 ALKAL1Q6UXT8 129 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 CMTM8Q8IZV2 173 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 TTC9BQ8N6N2 239 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 BICD2Q8TD16 824 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 SPACA7Q96KW9 195 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 ZMAT2Q96NC0 199 aaKnown RBP9.03□□□□□ -0.96
XRN1-212ENST00000486211 POLR3FQ9H1D9 316 aaPredicted RBP9.03□□□□□ -0.96
XRN1-212ENST00000486211 ECT2Q9H8V3 914 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 ASB3Q9Y575 518 aa9.03□□□□□ -0.96
XRN1-212ENST00000486211 ATMQ13315 3056 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 FAM149AA5PLN7 773 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 LRRIQ4A6NIV6 560 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 SLC27A2O14975 620 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 TLX3O43711 291 aaPredicted RBP9.02□□□□□ -0.97
XRN1-212ENST00000486211 SOAT2O75908 522 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 SYPP08247 313 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 ATXN1LP0C7T5 689 aaKnown RBP9.02□□□□□ -0.97
XRN1-212ENST00000486211 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.97
XRN1-212ENST00000486211 ALDH1A3P47895 512 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 NUCB1Q02818 461 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 CYP4A11Q02928 519 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 GPR17Q13304 367 aa9.02□□□□□ -0.97
XRN1-212ENST00000486211 CTTNQ14247 550 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms