RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IFNKQ9P0W0 207 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 AFF4Q9UHB7 1163 aaKnown RBP12.14□□□□□ -0.47
NUP50-216ENST00000486184 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 DAAM1Q9Y4D1 1078 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 HCFC2Q9Y5Z7 792 aa12.14□□□□□ -0.47
NUP50-216ENST00000486184 HCRTO43612 131 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 GABBR2O75899 941 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 ATF2P15336 505 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 EPCAMP16422 314 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
NUP50-216ENST00000486184 KCNMA1Q12791 1236 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 ORC1Q13415 861 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 MDH1BQ5I0G3 518 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
NUP50-216ENST00000486184 CACNA2D4Q7Z3S7 1137 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 ACOT1Q86TX2 421 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 B3GALNT2Q8NCR0 500 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 SPPL2BQ8TCT7 592 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 SLC22A17Q8WUG5 538 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 HDAC7Q8WUI4 952 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 MED10Q9BTT4 135 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 ABI2Q9NYB9 513 aaPredicted RBP12.13□□□□□ -0.47
NUP50-216ENST00000486184 FBXW11Q9UKB1 542 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 DNAJC12Q9UKB3 198 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 GTF3C4Q9UKN8 822 aa12.13□□□□□ -0.47
NUP50-216ENST00000486184 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 TEX33O43247 280 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 ATP2C2O75185 946 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 ABLIM3O94929 683 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 LRG1P02750 347 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 C8AP07357 584 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 UCHL3P15374 230 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 CD19P15391 556 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 APBA1Q02410 837 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 PLD1Q13393 1074 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 ADAM15Q13444 863 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 MGAT5BQ3V5L5 792 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 PPM1LQ5SGD2 360 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 ELMOD1Q8N336 334 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 KAT5Q92993 513 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 PABPC5Q96DU9 382 aaKnown RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 MS4A3Q96HJ5 214 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 TMEM176AQ96HP8 235 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 HEXIM2Q96MH2 286 aaKnown RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
NUP50-216ENST00000486184 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 CRTAC1Q9NQ79 661 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 C2orf16Q68DN1 1984 aa12.12□□□□□ -0.47
NUP50-216ENST00000486184 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 A0A1W2PQC6 194 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 MYBPHLA2RUH7 354 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 LINC01565O15544 149 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 ANXA13P27216 316 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
NUP50-216ENST00000486184 KLK7P49862 253 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 CDR1P51861 262 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 POLR2FP61218 127 aaKnown RBP12.11□□□□□ -0.47
NUP50-216ENST00000486184 NR1I3Q14994 352 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 IQCEQ6IPM2 695 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 FAM171BQ6P995 826 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 LILRA6Q6PI73 481 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 RTL10Q7L3V2 364 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 LRRTM3Q86VH5 581 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 PCED1BQ96HM7 432 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
NUP50-216ENST00000486184 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 TRIM5Q9C035 493 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
NUP50-216ENST00000486184 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 NLRC4Q9NPP4 1024 aa12.11□□□□□ -0.47
NUP50-216ENST00000486184 FAM49BQ9NUQ9 324 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms