RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LIPAP38571 399 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 EVA1CP58658 441 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 SP2Q02086 613 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 KLF9Q13886 244 aaPredicted RBP5.16□□□□□ -1.58
GCFC2-209ENST00000486016 GPR162Q16538 588 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 AARS2Q5JTZ9 985 aaKnown RBP5.16□□□□□ -1.58
GCFC2-209ENST00000486016 ZNF618Q5T7W0 954 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.16□□□□□ -1.58
GCFC2-209ENST00000486016 DDX17Q92841 729 aaKnown RBP5.16□□□□□ -1.58
GCFC2-209ENST00000486016 ASPSCR1Q9BZE9 553 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 ABCF2Q9UG63 623 aa5.16□□□□□ -1.58
GCFC2-209ENST00000486016 ADAMTS3O15072 1205 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 DNAJB5O75953 348 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 ONECUT2O95948 504 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 AHSGP02765 367 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 IL6RP08887 468 aaPredicted RBP5.15□□□□□ -1.59
GCFC2-209ENST00000486016 PIM1P11309 404 aaPredicted RBP5.15□□□□□ -1.59
GCFC2-209ENST00000486016 TYRP14679 529 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 KELP23276 732 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 MAP2K6P52564 334 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 FAM50AQ14320 339 aaKnown RBP5.15□□□□□ -1.59
GCFC2-209ENST00000486016 TEDDM1Q5T9Z0 273 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 THEMIS2Q5TEJ8 643 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 EMC10Q5UCC4 262 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 FAM160B1Q5W0V3 765 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 TMEM108Q6UXF1 575 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 USP45Q70EL2 814 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 MIER2Q8N344 545 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 TNPO1Q92973 898 aaKnown RBP5.15□□□□□ -1.59
GCFC2-209ENST00000486016 RGMAQ96B86 450 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.15□□□□□ -1.59
GCFC2-209ENST00000486016 HESX1Q9UBX0 185 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 SSX2IPQ9Y2D8 614 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 CADPSQ9ULU8 1353 aa5.15□□□□□ -1.59
GCFC2-209ENST00000486016 ALG1L2C9J202 215 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 M0QYG6 137 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 POU2F2P09086 479 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 NDUFB7P17568 137 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 SFPQP23246 707 aaKnown RBP eCLIP5.14□□□□□ -1.59
GCFC2-209ENST00000486016 CEP78Q5JTW2 689 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 ICE2Q659A1 982 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 QTRT1Q9BXR0 403 aaKnown RBP5.14□□□□□ -1.59
GCFC2-209ENST00000486016 SH2B3Q9UQQ2 575 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 SPEF1Q9Y4P9 236 aa5.14□□□□□ -1.59
GCFC2-209ENST00000486016 PRRT4C9JH25 899 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 SLC16A3O15427 465 aaKnown RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 MOSPD3O75425 235 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 CERS1P27544 350 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 EPHB2P29323 1055 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 RECQLP46063 649 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 ALDH9A1P49189 494 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 TUBA4AP68366 448 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 NKX6-1P78426 367 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 ETFDHQ16134 617 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 TMEM240Q5SV17 173 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 MORN5Q5VZ52 161 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 SFRP4Q6FHJ7 346 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 WDR53Q7Z5U6 358 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 YTHDF3Q7Z739 585 aaKnown RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 FAM46DQ8NEK8 389 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 RPL36ALQ969Q0 106 aaKnown RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 FAM167AQ96KS9 214 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 ZNF48Q96MX3 618 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 SLC46A1Q96NT5 459 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 BHMT2Q9H2M3 363 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 DUSP22Q9NRW4 184 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 LMBRD1Q9NUN5 540 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 SH3BP4Q9P0V3 963 aa5.13□□□□□ -1.59
GCFC2-209ENST00000486016 FEZ2Q9UHY8 353 aaPredicted RBP5.13□□□□□ -1.59
GCFC2-209ENST00000486016 PPP6CO00743 305 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 ERC2O15083 957 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 KCNAB3O43448 404 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 TLR5O60602 858 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 HOXB6P17509 224 aaKnown RBP5.12□□□□□ -1.59
GCFC2-209ENST00000486016 HDCP19113 662 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 MPGP29372 298 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 CYP2C18P33260 490 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 EEFSECP57772 596 aaKnown RBP5.12□□□□□ -1.59
GCFC2-209ENST00000486016 SUPT20HL1Q3ZLR7 823 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 RNF187Q5TA31 235 aaPredicted RBP5.12□□□□□ -1.59
GCFC2-209ENST00000486016 PRAMEF17Q5VTA0 474 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 SLC29A4Q7RTT9 530 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 CPA6Q8N4T0 437 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 PCDHA1Q9Y5I3 950 aa5.12□□□□□ -1.59
GCFC2-209ENST00000486016 CACNA1IQ9P0X4 2223 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 TJP3O95049 919 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 FTLP02792 175 aaPredicted RBP5.11□□□□□ -1.59
GCFC2-209ENST00000486016 TUBB4AP04350 444 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 GNAI2P04899 355 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 PPIFP30405 207 aaKnown RBP5.11□□□□□ -1.59
GCFC2-209ENST00000486016 CYP4F2P78329 520 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 EXOSC9Q06265 439 aaKnown RBP5.11□□□□□ -1.59
GCFC2-209ENST00000486016 TREML2Q5T2D2 321 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 SLC18B1Q6NT16 456 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 MACROD1Q9BQ69 325 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 SH2D3AQ9BRG2 576 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 PTDSS2Q9BVG9 487 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 FSD1LQ9BXM9 530 aa5.11□□□□□ -1.59
GCFC2-209ENST00000486016 PNPOQ9NVS9 261 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms