RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	ABLIM3	O94929	683 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	GLP2R	O95838	553 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	UCHL3	P15374	230 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	PTPN1	P18031	435 aa	Known RBP	13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	TBXAS1	P24557	533 aa	Predicted RBP	13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	MFAP3	P55082	362 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	POLR2F	P61218	127 aa	Known RBP	13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	DLX2	Q07687	328 aa	Predicted RBP	13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	KCNC3	Q14003	757 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	FAM171B	Q6P995	826 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	PAQR9	Q6ZVX9	377 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	ZSWIM1	Q9BR11	485 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	B3GNT5	Q9BYG0	378 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	NLRC4	Q9NPP4	1024 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	PLCB1	Q9NQ66	1216 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	CDH9	Q9ULB4	789 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	SLC27A5	Q9Y2P5	690 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	HCFC2	Q9Y5Z7	792 aa		13.53	□□□□□ -0.24
HDAC7-223	ENST00000485796	MTMR11	A4FU01	709 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	ADCY5	O95622	1261 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	ADH1A	P07327	375 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	CCDC130	P13994	396 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	CPB1	P15086	417 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	TRIM21	P19474	475 aa	Known RBP	13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	SSTR3	P32745	418 aa	Predicted RBP	13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	GPR15	P49685	360 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	ZNF132	P52740	706 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	CACNA2D1	P54289	1103 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	ADCY1	Q08828	1119 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	GPR17	Q13304	367 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	RAPGEF1	Q13905	1077 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	BMS1	Q14692	1282 aa	Known RBP	13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	DRAP1	Q14919	205 aa	Predicted RBP	13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	PDXDC1	Q6P996	788 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	TMEM270	Q6UE05	265 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	VSTM4	Q8IW00	320 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	CRYBG2	Q8N1P7	616 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	C12orf76	Q8N812	135 aa	Predicted RBP	13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	B3GALNT2	Q8NCR0	500 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	SPATA18	Q8TC71	538 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	TFAP2B	Q92481	460 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	SHC3	Q92529	594 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	MYLPF	Q96A32	169 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	FAXDC2	Q96IV6	333 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	FAM81B	Q96LP2	452 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	FAM49B	Q9NUQ9	324 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	TMEM30A	Q9NV96	361 aa		13.52	□□□□□ -0.25
HDAC7-223	ENST00000485796	MYH10	P35580	1976 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	PLXNA3	P51805	1871 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	GLUD1	P00367	558 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	KRT5	P13647	590 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CYP2F1	P24903	491 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	PCSK1	P29120	753 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CLCN1	P35523	988 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	LTBR	P36941	435 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	USP8	P40818	1118 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	MRE11	P49959	708 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	YWHAE	P62258	255 aa	Known RBP	13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	TSPY1	Q01534	308 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	DUSP4	Q13115	394 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	ADAM15	Q13444	863 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	SDHAF4	Q5VUM1	108 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	ENOSF1	Q7L5Y1	443 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CACNA2D4	Q7Z3S7	1137 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	TMC6	Q7Z403	805 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	UNC93A	Q86WB7	457 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	EFHB	Q8N7U6	833 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	KREMEN2	Q8NCW0	462 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	STKLD1	Q8NE28	680 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	ZNF461	Q8TAF7	563 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	MYCBPAP	Q8TBZ2	947 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CPLX3	Q8WVH0	158 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	PCED1B	Q96HM7	432 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	TMEM176A	Q96HP8	235 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	HEXIM2	Q96MH2	286 aa	Known RBP	13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	NUP58	Q9BVL2	599 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	APOL5	Q9BWW9	433 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	NT5C1A	Q9BXI3	368 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	ZNF518B	Q9C0D4	1074 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	TTYH3	Q9C0H2	523 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	ABI2	Q9NYB9	513 aa	Predicted RBP	13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CLEC1B	Q9P126	229 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	AFF4	Q9UHB7	1163 aa	Known RBP	13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CDH22	Q9UJ99	828 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	FBXW11	Q9UKB1	542 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	CNTN6	Q9UQ52	1028 aa		13.51	□□□□□ -0.25
HDAC7-223	ENST00000485796	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	2e-6	■■□□□ 11.7
HDAC7-223	ENST00000485796	CYP26A1	O43174	497 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	RFPL2	O75678	378 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	CFH	P08603	1231 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	RFX1	P22670	979 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	BRD2	P25440	801 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	JAM2	P57087	298 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	CYP27A1	Q02318	531 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	CREM	Q03060	361 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	GOLGA8F	Q08AF8	430 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	GOLGA8DP	Q0D2H9	430 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	CTC1	Q2NKJ3	1217 aa		13.5	□□□□□ -0.25
HDAC7-223	ENST00000485796	SPECC1L	Q69YQ0	1117 aa		13.5	□□□□□ -0.25

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