RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 INTS13Q9NVM9 706 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 HCFC1R1Q9NWW0 138 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 ZDHHC7Q9NXF8 308 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 HSPBP1Q9NZL4 362 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 HSFX1Q9UBD0 423 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 HMGXB4Q9UGU5 601 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 FAM50BQ9Y247 325 aa6.18□□□□□ -1.42
CUX1-208ENST00000485792 TIMM13Q9Y5L4 95 aaPredicted RBP6.18□□□□□ -1.42
CUX1-208ENST00000485792 FRYLO94915 3013 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 FAM86C2PA6NEL3 165 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 ZNF233A6NK53 670 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 C2CD4DB7Z1M9 353 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 CLIC2O15247 247 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
CUX1-208ENST00000485792 TADA3O75528 432 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 GLUD1P00367 558 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 HNRNPA1P09651 372 aaKnown RBP eCLIP6.17□□□□□ -1.42
CUX1-208ENST00000485792 ATF2P15336 505 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 KLRC2P26717 231 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 MTHFRP42898 656 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 GPR15P49685 360 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
CUX1-208ENST00000485792 CACNA2D1P54289 1103 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 EPHA5P54756 1037 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 RAB15P59190 212 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 ROR1Q01973 937 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 CYP24A1Q07973 514 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 GPR17Q13304 367 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 TMEM132DQ14C87 1099 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 SURF1Q15526 300 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 SNRNP35Q16560 246 aaKnown RBP6.17□□□□□ -1.42
CUX1-208ENST00000485792 WDR44Q5JSH3 913 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 TPGS2Q68CL5 300 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 ZNF787Q6DD87 383 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 LRRTM3Q86VH5 581 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 CCDC116Q8IYX3 515 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 ZDHHC14Q8IZN3 488 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 GJD3Q8N144 294 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 LRRC52Q8N7C0 313 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 XXYLT1Q8NBI6 393 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 KREMEN2Q8NCW0 462 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 HPS1Q92902 700 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 BICD1Q96G01 975 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 EEF2KMTQ96G04 330 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 FAM213AQ9BRX8 229 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 LRRC3Q9BY71 257 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 EPHX3Q9H6B9 360 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 SFXN1Q9H9B4 322 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 WDR6Q9NNW5 1121 aaKnown RBP6.17□□□□□ -1.42
CUX1-208ENST00000485792 MAN1C1Q9NR34 630 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 DPP3Q9NY33 737 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 CHMP5Q9NZZ3 219 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 DPP7Q9UHL4 492 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 FBXL5Q9UKA1 691 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 ITGA11Q9UKX5 1188 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 L1RE1Q9UN81 338 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 MAPK8IP1Q9UQF2 711 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 CEP192Q8TEP8 1941 aa6.17□□□□□ -1.42
CUX1-208ENST00000485792 LRRIQ3A6PVS8 624 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 KPNA7A9QM74 516 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 H7C4K7 107 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 ERVH48-1M5A8F1 160 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 IKBKBO14920 756 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 AKAP3O75969 853 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 MICAL2O94851 1124 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 CST3P01034 146 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 PDGFBP01127 241 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 C4BPAP04003 597 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 SRGAP2BP0DMP2 458 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 ATF6P18850 670 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 FCARP24071 287 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 OR1D2P34982 312 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 PNPLA4P41247 253 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 TAF6P49848 677 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 EDRF1Q3B7T1 1238 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 RARS2Q5T160 578 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 STXBP5Q5T5C0 1151 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 ZNF658Q5TYW1 1059 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 ARMCX5Q6P1M9 558 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 TMC5Q6UXY8 1006 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 TRAPPC11Q7Z392 1133 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 TMEM150AQ86TG1 271 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 TMC8Q8IU68 726 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 WDR49Q8IV35 697 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 SYCP3Q8IZU3 236 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 APPL2Q8NEU8 664 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 GPT2Q8TD30 523 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 CACTINQ8WUQ7 758 aaKnown RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 RSPRY1Q96DX4 576 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 CCDC97Q96F63 343 aaPredicted RBP6.16□□□□□ -1.42
CUX1-208ENST00000485792 SENP8Q96LD8 212 aa6.16□□□□□ -1.42
CUX1-208ENST00000485792 MYADMQ96S97 322 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms