RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SPATA2LQ8IUW3 424 aaPredicted RBP14.78□□□□□ -0.04
SCAF4-206ENST00000485790 TOP6BLQ8N6T0 577 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 MAB21L3Q8N8X9 362 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 C1orf127Q8N9H9 656 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 TTC8Q8TAM2 541 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 RMDN1Q96DB5 314 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 PI4K2AQ9BTU6 479 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 MKNK1Q9BUB5 465 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 TNMDQ9H2S6 317 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 IL21Q9HBE4 155 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 PDE11AQ9HCR9 933 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 GTSE1Q9NYZ3 720 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 MAGED2Q9UNF1 606 aaPredicted RBP14.78□□□□□ -0.04
SCAF4-206ENST00000485790 GVINP1Q7Z2Y8 2422 aa14.78□□□□□ -0.04
SCAF4-206ENST00000485790 DMDP11532 3685 aa14.77□□□□□ -0.04
SCAF4-206ENST00000485790 VWA8A3KMH1 1905 aa14.77□□□□□ -0.04
SCAF4-206ENST00000485790 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 PPP6R2O75170 966 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 F11P03951 625 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 CTHP32929 405 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 NASPP49321 788 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 NLRP12P59046 1061 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 GRSF1Q12849 480 aaKnown RBP eCLIP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 MAPRE1Q15691 268 aaKnown RBP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 C4orf50Q6ZRC1 276 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 LINC00301Q8NCQ3 95 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 LEO1Q8WVC0 666 aaPredicted RBP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 HPDLQ96IR7 371 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 ZFYVE19Q96K21 471 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 CBWD1Q9BRT8 395 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 KIF9Q9HAQ2 790 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 EHD2Q9NZN4 543 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 TFIP11Q9UBB9 837 aaKnown RBP14.77□□□□□ -0.05
SCAF4-206ENST00000485790 GTF3C4Q9UKN8 822 aa14.77□□□□□ -0.05
SCAF4-206ENST00000485790 FRYLO94915 3013 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 HMGA1P17096 107 aaKnown RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 SOX9P48436 509 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 CASP5P51878 434 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 SNRPFP62306 86 aaKnown RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 RUNX3Q13761 415 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 SIM2Q14190 667 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 PON2Q15165 354 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 PDGFRLQ15198 375 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 DDR2Q16832 855 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 RSPO4Q2I0M5 234 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 INTS6LQ5JSJ4 861 aaKnown RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 LAIR1Q6GTX8 287 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 LONP2Q86WA8 852 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 FUBP3Q96I24 572 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 INTS13Q9NVM9 706 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 MAGEC2Q9UBF1 373 aaPredicted RBP14.76□□□□□ -0.05
SCAF4-206ENST00000485790 USP18Q9UMW8 372 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
SCAF4-206ENST00000485790 FOXD2O60548 495 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 CUTAO60888 179 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 PAPSS2O95340 614 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 PRAMEF12O95522 483 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 RETP07949 1114 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 FAM163BP0C2L3 166 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 USP17L7P0C7H9 530 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 CYP2F1P24903 491 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 HOXA6P31267 233 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 PDE6CP51160 858 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 ASIC1P78348 528 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 SATB1Q01826 763 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 TNK2Q07912 1038 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 NR1H3Q13133 447 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 ZNF268Q14587 947 aaPredicted RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 CFAP221Q4G0U5 840 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 TXNDC8Q6A555 127 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 PRR23BQ6ZRT6 265 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 HS2ST1Q7LGA3 356 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 CCDC26Q8TAB7 109 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 TRMT2BQ96GJ1 504 aaKnown RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 MYRFLQ96LU7 910 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 CEP295NLQ96MC4 621 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 FNBP1Q96RU3 617 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 FAM83CQ9BQN1 747 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 BACH2Q9BYV9 841 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 SMG9Q9H0W8 520 aaKnown RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 RBM12Q9NTZ6 932 aaKnown RBP14.75□□□□□ -0.05
SCAF4-206ENST00000485790 TMLHEQ9NVH6 421 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 KBTBD4Q9NVX7 518 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 DLL3Q9NYJ7 618 aa14.75□□□□□ -0.05
SCAF4-206ENST00000485790 TRAV19A0A0A6YYK7 116 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 CHURC1-FNTBB4DL54 471 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 GABRDO14764 452 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 EIF3DO15371 548 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCAF4-206ENST00000485790 NOL4O94818 638 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 YEATS4O95619 227 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 TDGF1P13385 188 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 TNNI1P19237 187 aa14.74□□□□□ -0.05
SCAF4-206ENST00000485790 ACAT1P24752 427 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms