RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	EPHB3	P54753	998 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	LRRC32	Q14392	662 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	SLFN12L	Q6IEE8	588 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	CENPP	Q6IPU0	288 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	TXNDC11	Q6PKC3	985 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	SV2B	Q7L1I2	683 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	KBTBD6	Q86V97	674 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	WDR5B	Q86VZ2	330 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	ZSWIM2	Q8NEG5	633 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	OR10T2	Q8NGX3	314 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	SHKBP1	Q8TBC3	707 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	POMGNT1	Q8WZA1	660 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	USP28	Q96RU2	1077 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	PYM1	Q9BRP8	204 aa	Known RBP	11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	LSM14B	Q9BX40	385 aa	Known RBP	11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	DNAJC25	Q9H1X3	360 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	MRPL44	Q9H9J2	332 aa	Known RBP	11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	DPP3	Q9NY33	737 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	MAFF	Q9ULX9	164 aa		11.43	□□□□□ -0.58
HMGN1-215	ENST00000485550	ANO9	A1A5B4	782 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	ARNTL	O00327	626 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	GIPC1	O14908	333 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	MICAL2	O94851	1124 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	EPN2	O95208	641 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	GCNT3	O95395	438 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	ADSS	P30520	456 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	TXLNA	P40222	546 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	KPNA1	P52294	538 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	FOXC1	Q12948	553 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	PON2	Q15165	354 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	SLC39A12	Q504Y0	691 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	STXBP5	Q5T5C0	1151 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	TCEAL6	Q6IPX3	200 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	MFSD6L	Q8IWD5	586 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	PDILT	Q8N807	584 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	FAM200A	Q8TCP9	573 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	NOC3L	Q8WTT2	800 aa	Known RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	TCEAL3	Q969E4	200 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	DNAJC19	Q96DA6	116 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	RSPRY1	Q96DX4	576 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	SAAL1	Q96ER3	474 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	FAM84A	Q96KN4	292 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	TSPAN18	Q96SJ8	248 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	SEPT5	Q99719	369 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	FAM213A	Q9BRX8	229 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	LRRC3	Q9BY71	257 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	ST6GALNAC4	Q9H4F1	302 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	ASB7	Q9H672	318 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	STK17A	Q9UEE5	414 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	MTMR6	Q9Y217	621 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	STYXL1	Q9Y6J8	313 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	KIAA1549L	Q6ZVL6	1849 aa		11.42	□□□□□ -0.58
HMGN1-215	ENST00000485550	MYH11	P35749	1972 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	ADAMTS20	P59510	1910 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	ADAMTS9	Q9P2N4	1935 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550		A0A087X0B3	334 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	GOLGA8IP	A6NC78	632 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	GOLGA8J	A6NMD2	632 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	SPECC1L-ADORA2A	F8WAN1	911 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	TOP3B	O95985	862 aa	Known RBP	11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	CCDC192	P0DO97	292 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	ABCD1	P33897	745 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	STAT6	P42226	847 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	TAF6	P49848	677 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	NOVA1	P51513	510 aa	Known RBP	11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	CASP5	P51878	434 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	EPHA5	P54756	1037 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	WNT7B	P56706	349 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	TFAM	Q00059	246 aa	Known RBP	11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	PLD1	Q13393	1074 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	MYBPC2	Q14324	1141 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	POSTN	Q15063	836 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	MGAT5B	Q3V5L5	792 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	DGKK	Q5KSL6	1271 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	WSCD1	Q658N2	575 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	RNF43	Q68DV7	783 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	SCARA3	Q6AZY7	606 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	CACNA2D4	Q7Z3S7	1137 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	METTL23	Q86XA0	190 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	TMC8	Q8IU68	726 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	YAF2	Q8IY57	180 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	EFCAB13	Q8IY85	973 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	LEMD2	Q8NC56	503 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	GIPC2	Q8TF65	315 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	ACCS	Q96QU6	501 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	LPIN3	Q9BQK8	851 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	FGFBP2	Q9BYJ0	223 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	ATXN3L	Q9H3M9	355 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	PCIF1	Q9H4Z3	704 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	EXOC7	Q9UPT5	735 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	DERA	Q9Y315	318 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	C2CD2	Q9Y426	696 aa		11.41	□□□□□ -0.58
HMGN1-215	ENST00000485550	CACNA1E	Q15878	2313 aa		11.41	□□□□□ -0.58

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