RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ZNF618Q5T7W0 954 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 YTHDF3Q7Z739 585 aaKnown RBP5.68□□□□□ -1.5
SCAF11-207ENST00000484275 DTX2Q86UW9 622 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 MIER2Q8N344 545 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 TBC1D5Q92609 795 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 RGMAQ96B86 450 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 SEMA4CQ9C0C4 833 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 SIK2Q9H0K1 926 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 WDCPQ9H6R7 721 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-207ENST00000484275 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 SMIM22K7EJ46 135 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 ARIH2O95376 493 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 IL6RP08887 468 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-207ENST00000484275 PIM1P11309 404 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-207ENST00000484275 CYP2C18P33260 490 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 MAP2K6P52564 334 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 AARS2Q5JTZ9 985 aaKnown RBP5.67□□□□□ -1.5
SCAF11-207ENST00000484275 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 ZNF48Q96MX3 618 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-207ENST00000484275 SLC46A1Q96NT5 459 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 ASPSCR1Q9BZE9 553 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 SSX2IPQ9Y2D8 614 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 PCDHA1Q9Y5I3 950 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
SCAF11-207ENST00000484275 SLC16A6O15403 523 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 DNAJB5O75953 348 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 FTLP02792 175 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 CYP2D6P10635 497 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 TYRP14679 529 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 SFPQP23246 707 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 ALDH9A1P49189 494 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 EXOSC9Q06265 439 aaKnown RBP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 TREML2Q5T2D2 321 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 FAM160B1Q5W0V3 765 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 ANKRD16Q6P6B7 361 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 USP45Q70EL2 814 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 SLC29A4Q7RTT9 530 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 FANCBQ8NB91 859 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 RPL36ALQ969Q0 106 aaKnown RBP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 ZBTB9Q96C00 473 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 NELL2Q99435 816 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 SMAD5Q99717 465 aaKnown RBP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 MACROD1Q9BQ69 325 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 TTYH3Q9C0H2 523 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 HESX1Q9UBX0 185 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 FEZ2Q9UHY8 353 aaPredicted RBP5.66□□□□□ -1.5
SCAF11-207ENST00000484275 SERTAD3Q9UJW9 196 aa5.66□□□□□ -1.5
SCAF11-207ENST00000484275 PPP6CO00743 305 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 GNAI2P04899 355 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 CERS1P27544 350 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 EEFSECP57772 596 aaKnown RBP5.65□□□□□ -1.5
SCAF11-207ENST00000484275 TUBA4AP68366 448 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 CYP4F2P78329 520 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 MAPK7Q13164 816 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 TEDDM1Q5T9Z0 273 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 ICE2Q659A1 982 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 SLC18B1Q6NT16 456 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 CPA6Q8N4T0 437 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 DUSP22Q9NRW4 184 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 LMBRD1Q9NUN5 540 aa5.65□□□□□ -1.5
SCAF11-207ENST00000484275 PRRT4C9JH25 899 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 MYO1FO00160 1098 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 SLC16A3O15427 465 aaKnown RBP5.64□□□□□ -1.51
SCAF11-207ENST00000484275 POU2F2P09086 479 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 HDCP19113 662 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 CCND1P24385 295 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 PCID2Q5JVF3 399 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 RNF187Q5TA31 235 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-207ENST00000484275 THEMIS2Q5TEJ8 643 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 SLC2A7Q6PXP3 512 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 CATIPQ7Z7H3 387 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 DDX17Q92841 729 aaKnown RBP5.64□□□□□ -1.51
SCAF11-207ENST00000484275 PNPOQ9NVS9 261 aa5.64□□□□□ -1.51
SCAF11-207ENST00000484275 ALG1L2C9J202 215 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 QSOX1O00391 747 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 ADAMTS3O15072 1205 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 TLR5O60602 858 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 MOSPD3O75425 235 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 FESP07332 822 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 ENGP17813 658 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 PTGER1P34995 402 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 RECQLP46063 649 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-207ENST00000484275 LILRA4P59901 499 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 NKX6-1P78426 367 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-207ENST00000484275 PLS1Q14651 629 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 NAPRTQ6XQN6 538 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 WDR53Q7Z5U6 358 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-207ENST00000484275 CHSY1Q86X52 802 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 CELF5Q8N6W0 485 aaKnown RBP5.63□□□□□ -1.51
SCAF11-207ENST00000484275 PCSK9Q8NBP7 692 aaKnown RBP5.63□□□□□ -1.51
SCAF11-207ENST00000484275 ATG4AQ8WYN0 398 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 FCRL4Q96PJ5 515 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 CAMKK2Q96RR4 588 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 NRIP3Q9NQ35 241 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 ZNF521Q96K83 1311 aa5.63□□□□□ -1.51
SCAF11-207ENST00000484275 TOP3BO95985 862 aaKnown RBP5.62□□□□□ -1.51
SCAF11-207ENST00000484275 TUBB4AP04350 444 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms