RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RNF168Q8IYW5 571 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 GPD1LQ8N335 351 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 MRPL43Q8N983 215 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 KCNN1Q92952 543 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 FAM81BQ96LP2 452 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ALS2CR12Q96Q35 445 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PPP1R10Q96QC0 940 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 NAPGQ99747 312 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TMEM175Q9BSA9 504 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 HERC2P3Q9BVR0 1158 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 TMUB1Q9BVT8 246 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 L2HGDHQ9H9P8 463 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 APEX2Q9UBZ4 518 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PUF60Q9UHX1 559 aaKnown RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 LZTS1Q9Y250 596 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 USP15Q9Y4E8 981 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PCDHGA10Q9Y5H3 936 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 PCDHA13Q9Y5I0 950 aa7.43□□□□□ -1.22
BRCA1-216ENST00000484087 SMIM28A0A1B0GU29 152 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 GOLGA8IPA6NC78 632 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 GOLGA8JA6NMD2 632 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 PMM2O15305 246 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TEX28O15482 410 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 FAM189A1O60320 539 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TACC1O75410 805 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TOM1L1O75674 476 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 EFEMP2O95967 443 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 SOD2P04179 222 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 ALDH2P05091 517 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 URODP06132 367 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 THP07101 528 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TKTP29401 623 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 GTF2H1P32780 548 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 ACOT2P49753 483 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 MXI1P50539 228 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TUBB4BP68371 445 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 RARS2Q5T160 578 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 KRT39Q6A163 491 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 ANKRD54Q6NXT1 300 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TMC5Q6UXY8 1006 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 PALB2Q86YC2 1186 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 HACE1Q8IYU2 909 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 SMRP1Q8NCR6 262 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 TRIM58Q8NG06 486 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 RIN2Q8WYP3 895 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 SECISBP2LQ93073 1101 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 SAAL1Q96ER3 474 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 KLHL5Q96PQ7 755 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 CCDC94Q9BW85 323 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 STK33Q9BYT3 514 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 NGRNQ9NPE2 291 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 UBN1Q9NPG3 1134 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 NPDC1Q9NQX5 325 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 KANSL3Q9P2N6 904 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 REXO2Q9Y3B8 237 aaKnown RBP7.42□□□□□ -1.22
BRCA1-216ENST00000484087 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
BRCA1-216ENST00000484087 COL4A3Q01955 1670 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 LACTBL1A8MY62 500 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 TNFRSF10AO00220 468 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CLDN3O15551 220 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CTIFO43310 598 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 EXTL3O43909 919 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 LILRB3O75022 631 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 TADA2AO75478 443 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 RFPL2O75678 378 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 GFPT2O94808 682 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 PLEKP08567 350 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 NFICP08651 508 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 MCF2P10911 925 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 KLRC2P26717 231 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 SOX5P35711 763 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 PRKCIP41743 596 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 ARHGAP25P42331 645 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 GCLMP48507 274 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 GLUD2P49448 558 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CLCN4P51793 760 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 YARSP54577 528 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 NAP1L1P55209 391 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 ZP2Q05996 745 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 MCL1Q07820 350 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 SMAD4Q13485 552 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 ENOX2Q16206 610 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 IFI16Q16666 785 aaKnown RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 AAK1Q2M2I8 961 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CBWD6Q4V339 395 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CBWD3Q5JTY5 395 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 CBWD5Q5RIA9 395 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 FAM171A1Q5VUB5 890 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 HGSNATQ68CP4 663 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-216ENST00000484087 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
BRCA1-216ENST00000484087 RSPO2Q6UXX9 243 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms