RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 BFSP1Q12934 665 aa21.32■■□□□ 1
HPS4-213ENST00000483631 ARHGAP29Q52LW3 1261 aa21.32■■□□□ 1
HPS4-213ENST00000483631 INTS6LQ5JSJ4 861 aaKnown RBP21.32■■□□□ 1
HPS4-213ENST00000483631 CBWD2Q8IUF1 395 aa21.32■■□□□ 1
HPS4-213ENST00000483631 C12orf56Q8IXR9 622 aa21.32■■□□□ 1
HPS4-213ENST00000483631 CSGALNACT1Q8TDX6 532 aa21.32■■□□□ 1
HPS4-213ENST00000483631 HPS3Q969F9 1004 aa21.32■■□□□ 1
HPS4-213ENST00000483631 FUBP3Q96I24 572 aaKnown RBP eCLIP21.32■■□□□ 1
HPS4-213ENST00000483631 PKMYT1Q99640 499 aa21.32■■□□□ 1
HPS4-213ENST00000483631 C8orf33Q9H7E9 229 aaPredicted RBP21.32■■□□□ 1
HPS4-213ENST00000483631 AGPAT3Q9NRZ7 376 aa21.32■■□□□ 1
HPS4-213ENST00000483631 SNX9Q9Y5X1 595 aa21.32■■□□□ 1
HPS4-213ENST00000483631 PIAS3Q9Y6X2 628 aa21.32■■□□□ 1
HPS4-213ENST00000483631 KIF26AQ9ULI4 1882 aaPredicted RBP21.32■■□□□ 1
HPS4-213ENST00000483631 SPTBN4Q9H254 2564 aa21.32■■□□□ 1
HPS4-213ENST00000483631 DPYSL4O14531 572 aa21.31■■□□□ 1
HPS4-213ENST00000483631 TGFB1I1O43294 461 aa21.31■■□□□ 1
HPS4-213ENST00000483631 RPL10AP62906 217 aaKnown RBP21.31■■□□□ 1
HPS4-213ENST00000483631 PLCB2Q00722 1185 aa21.31■■□□□ 1
HPS4-213ENST00000483631 SNRNP35Q16560 246 aaKnown RBP21.31■■□□□ 1
HPS4-213ENST00000483631 CFAP221Q4G0U5 840 aa21.31■■□□□ 1
HPS4-213ENST00000483631 STXBP5Q5T5C0 1151 aa21.31■■□□□ 1
HPS4-213ENST00000483631 FOXD4L5Q5VV16 416 aaPredicted RBP21.31■■□□□ 1
HPS4-213ENST00000483631 HS2ST1Q7LGA3 356 aa21.31■■□□□ 1
HPS4-213ENST00000483631 ADGRF2Q8IZF7 708 aa21.31■■□□□ 1
HPS4-213ENST00000483631 NOC3LQ8WTT2 800 aaKnown RBP21.31■■□□□ 1
HPS4-213ENST00000483631 SCFD1Q8WVM8 642 aa21.31■■□□□ 1
HPS4-213ENST00000483631 FOXD4L4Q8WXT5 416 aaPredicted RBP21.31■■□□□ 1
HPS4-213ENST00000483631 FAM3CQ92520 227 aa21.31■■□□□ 1
HPS4-213ENST00000483631 RSPRY1Q96DX4 576 aa21.31■■□□□ 1
HPS4-213ENST00000483631 CHRDQ9H2X0 955 aa21.31■■□□□ 1
HPS4-213ENST00000483631 TMLHEQ9NVH6 421 aa21.31■■□□□ 1
HPS4-213ENST00000483631 CFAP54Q96N23 3096 aa21.3■■□□□ 1
HPS4-213ENST00000483631 FAM163BP0C2L3 166 aa21.3■■□□□ 1
HPS4-213ENST00000483631 HMGA1P17096 107 aaKnown RBP21.3■■□□□ 1
HPS4-213ENST00000483631 SOWAHAQ2M3V2 549 aa21.3■■□□□ 1
HPS4-213ENST00000483631 ADSSL1Q8N142 457 aa21.3■■□□□ 1
HPS4-213ENST00000483631 XXYLT1Q8NBI6 393 aa21.3■■□□□ 1
HPS4-213ENST00000483631 OR5B17Q8NGF7 314 aa21.3■■□□□ 1
HPS4-213ENST00000483631 NELL1Q92832 810 aa21.3■■□□□ 1
HPS4-213ENST00000483631 HPDLQ96IR7 371 aa21.3■■□□□ 1
HPS4-213ENST00000483631 CEP295NLQ96MC4 621 aa21.3■■□□□ 1
HPS4-213ENST00000483631 FAM126AQ9BYI3 521 aaPredicted RBP21.3■■□□□ 1
HPS4-213ENST00000483631 PRMT8Q9NR22 394 aaPredicted RBP21.3■■□□□ 1
HPS4-213ENST00000483631 UXTQ9UBK9 157 aaPredicted RBP21.3■■□□□ 1
HPS4-213ENST00000483631 PCDHGA2Q9Y5H1 932 aa21.3■■□□□ 1
HPS4-213ENST00000483631 R4GN57 208 aa21.3■■□□□ 1
HPS4-213ENST00000483631 ZNF292O60281 2723 aa21.29■■□□□ 1
HPS4-213ENST00000483631 F11P03951 625 aa21.29■■□□□ 1
HPS4-213ENST00000483631 SLFN14P0C7P3 912 aa21.29■■□□□ 1
HPS4-213ENST00000483631 PSMD6Q15008 389 aa21.29■■□□□ 1
HPS4-213ENST00000483631 MAPRE1Q15691 268 aaKnown RBP21.29■■□□□ 1
HPS4-213ENST00000483631 CEP57L1Q8IYX8 460 aa21.29■■□□□ 1
HPS4-213ENST00000483631 CELF5Q8N6W0 485 aaKnown RBP21.29■■□□□ 1
HPS4-213ENST00000483631 GOLGA5Q8TBA6 731 aa21.29■■□□□ 1
HPS4-213ENST00000483631 BPIFB1Q8TDL5 484 aa21.29■■□□□ 1
HPS4-213ENST00000483631 GIPC2Q8TF65 315 aa21.29■■□□□ 1
HPS4-213ENST00000483631 TRMT2BQ96GJ1 504 aaKnown RBP21.29■■□□□ 1
HPS4-213ENST00000483631 MYRFLQ96LU7 910 aa21.29■■□□□ 1
HPS4-213ENST00000483631 USP25Q9UHP3 1055 aa21.29■■□□□ 1
HPS4-213ENST00000483631 PTPRJQ12913 1337 aa21.29■■□□□ 1
HPS4-213ENST00000483631 PTPRDP23468 1912 aa21.28■■□□□ 1
HPS4-213ENST00000483631 MAGEA11P43364 429 aa21.28■■□□□ 1
HPS4-213ENST00000483631 NLRP12P59046 1061 aa21.28■■□□□ 1
HPS4-213ENST00000483631 DNM1Q05193 864 aaKnown RBP21.28■■□□□ 1
HPS4-213ENST00000483631 FOXD4L6Q3SYB3 417 aaPredicted RBP21.28■■□□□ 1
HPS4-213ENST00000483631 LMBRD2Q68DH5 695 aaPredicted RBP21.28■■□□□ 1
HPS4-213ENST00000483631 FAM171BQ6P995 826 aa21.28■■□□□ 1
HPS4-213ENST00000483631 FOXD4L3Q6VB84 417 aaPredicted RBP21.28■■□□□ 1
HPS4-213ENST00000483631 C4orf50Q6ZRC1 276 aa21.28■■□□□ 1
HPS4-213ENST00000483631 TRAPPC11Q7Z392 1133 aa21.28■■□□□ 1
HPS4-213ENST00000483631 TMEM150AQ86TG1 271 aa21.28■■□□□ 1
HPS4-213ENST00000483631 OSTM1Q86WC4 334 aa21.28■■□□□ 1
HPS4-213ENST00000483631 RALGPS2Q86X27 583 aaPredicted RBP21.28■■□□□ 1
HPS4-213ENST00000483631 CMTM8Q8IZV2 173 aa21.28■■□□□ 1
HPS4-213ENST00000483631 ZBTB44Q8NCP5 570 aa21.28■■□□□ 1
HPS4-213ENST00000483631 TMEM174Q8WUU8 243 aa21.28■■□□□ 1
HPS4-213ENST00000483631 FNBP1Q96RU3 617 aa21.28■■□□□ 1
HPS4-213ENST00000483631 CGRRF1Q99675 332 aa21.28■■□□□ 1
HPS4-213ENST00000483631 PI4K2AQ9BTU6 479 aa21.28■■□□□ 1
HPS4-213ENST00000483631 SLC46A2Q9BY10 475 aa21.28■■□□□ 1
HPS4-213ENST00000483631 KIF9Q9HAQ2 790 aa21.28■■□□□ 1
HPS4-213ENST00000483631 THG1LQ9NWX6 298 aaKnown RBP21.28■■□□□ 1
HPS4-213ENST00000483631 CDH9Q9ULB4 789 aa21.28■■□□□ 1
HPS4-213ENST00000483631 GREB1Q4ZG55 1949 aa21.27■■□□□ 1
HPS4-213ENST00000483631 MYBPHLA2RUH7 354 aa21.27■■□□□ 1
HPS4-213ENST00000483631 TULP1O00294 542 aaPredicted RBP21.27■■□□□ 1
HPS4-213ENST00000483631 KINO60870 393 aaKnown RBP21.27■■□□□ 1
HPS4-213ENST00000483631 NOL4O94818 638 aa21.27■■□□□ 1
HPS4-213ENST00000483631 STAU1O95793 577 aaKnown RBP21.27■■□□□ 1
HPS4-213ENST00000483631 MYL1P05976 194 aa21.27■■□□□ 1
HPS4-213ENST00000483631 CYP4F8P98187 520 aa21.27■■□□□ 1
HPS4-213ENST00000483631 CSTF1Q05048 431 aaKnown RBP21.27■■□□□ 1
HPS4-213ENST00000483631 CYP24A1Q07973 514 aa21.27■■□□□ 1
HPS4-213ENST00000483631 PKP1Q13835 747 aa21.27■■□□□ 1
HPS4-213ENST00000483631 PPP2R5DQ14738 602 aa21.27■■□□□ 1
HPS4-213ENST00000483631 KNOP1Q1ED39 458 aaKnown RBP21.27■■□□□ 1
HPS4-213ENST00000483631 SCARA3Q6AZY7 606 aa21.27■■□□□ 1
HPS4-213ENST00000483631 MRPS31Q92665 395 aaKnown RBP21.27■■□□□ 1
HPS4-213ENST00000483631 LRRC3BQ96PB8 259 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms