RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ATL2Q8NHH9 583 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 NCAPGQ9BPX3 1015 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 TRIM51Q9BSJ1 452 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 EIF2AQ9BY44 585 aaKnown RBP12.6□□□□□ -0.39
SND1-210ENST00000483503 OSBPL8Q9BZF1 889 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 CDHR5Q9HBB8 845 aa12.6□□□□□ -0.39
SND1-210ENST00000483503 ABT1Q9ULW3 272 aaKnown RBP12.6□□□□□ -0.39
SND1-210ENST00000483503 MGAMO43451 1857 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 GOLGA6CA6NDK9 693 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 RECQL4O94761 1208 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 TJP3O95049 919 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 KRT1P04264 644 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 GOLGA6DP0CG33 693 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 RARBP10826 455 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 CYBAP13498 195 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 PSMA2P25787 234 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 PSMC4P43686 418 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 TAS2R40P59535 323 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 RPL7AP62424 266 aaKnown RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 NFX1Q12986 1120 aaKnown RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 SLMAPQ14BN4 828 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 SV2CQ496J9 727 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 XKR4Q5GH76 650 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 ZFYVE27Q5T4F4 411 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 LLGL2Q6P1M3 1020 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 CEP128Q6ZU80 1094 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 CROCCP2Q86T23 111 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
SND1-210ENST00000483503 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 FAM76AQ8TAV0 307 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 FRMD8P1Q9BZ68 369 aaPredicted RBP12.59□□□□□ -0.39
SND1-210ENST00000483503 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 GOLGA6AQ9NYA3 693 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 WHRNQ9P202 907 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
SND1-210ENST00000483503 GOLGA8SH3BPF8 625 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 PPFIA2O75334 1257 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 RNF8O76064 485 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 RALAP11233 206 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 HSD17B3P37058 310 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 GPD2P43304 727 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 MRPS6P82932 125 aaKnown RBP12.58□□□□□ -0.4
SND1-210ENST00000483503 DHX9Q08211 1270 aaKnown RBP12.58□□□□□ -0.4
SND1-210ENST00000483503 DMTNQ08495 405 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 PDCLQ13371 301 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 PTK6Q13882 451 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 TRADDQ15628 312 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 GNASQ5JWF2 1037 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 CYP4A22Q5TCH4 519 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 ZNF771Q7L3S4 317 aaPredicted RBP12.58□□□□□ -0.4
SND1-210ENST00000483503 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 STK32AQ8WU08 396 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 NXF3Q9H4D5 531 aaKnown RBP12.58□□□□□ -0.4
SND1-210ENST00000483503 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 CHST12Q9NRB3 414 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 GTF2IRD1Q9UHL9 959 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 PLAAQ9Y263 795 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
SND1-210ENST00000483503 SMIM28A0A1B0GU29 152 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 TCRBV7S2A1N4TA0A589 114 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 TMEM88BA6NKF7 163 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 PIRO00625 290 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 SEPT4O43236 478 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 ITIH2P19823 946 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 GJC1P36383 396 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 TAF6P49848 677 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 PLTPP55058 493 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
SND1-210ENST00000483503 KLF1Q13351 362 aaPredicted RBP12.57□□□□□ -0.4
SND1-210ENST00000483503 HIC1Q14526 733 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 FBXO47Q5MNV8 452 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 UBXN11Q5T124 520 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 TWF2Q6IBS0 349 aaKnown RBP12.57□□□□□ -0.4
SND1-210ENST00000483503 DRICH1Q6PGQ1 229 aaPredicted RBP12.57□□□□□ -0.4
SND1-210ENST00000483503 SPOCD1Q6ZMY3 1216 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 DPH6Q7L8W6 267 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 RPAINQ86UA6 219 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
SND1-210ENST00000483503 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms