RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TUSC3Q13454 348 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 HTR4Q13639 388 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 TRIM29Q14134 588 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 LRRC14Q15048 493 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 RNFT1Q5M7Z0 435 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 PPM1LQ5SGD2 360 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 LILRA6Q6PI73 481 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 MTSS1LQ765P7 747 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 CDR2LQ86X02 465 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 CEP57Q86XR8 500 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 C1orf210Q8IVY1 113 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 GSTCDQ8NEC7 633 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 MCPH1Q8NEM0 835 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 STK35Q8TDR2 534 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 B3GALT6Q96L58 329 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 HSD17B14Q9BPX1 270 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 ADPGKQ9BRR6 497 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 C2orf40Q9H1Z8 148 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 TTC12Q9H892 705 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 PRMT7Q9NVM4 692 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 FBXW11Q9UKB1 542 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 CDH7Q9ULB5 785 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 NUMBLQ9Y6R0 609 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 R4GN57 208 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.37
CSDE1-207ENST00000483407 CASTOR2A6NHX0 329 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 H3BRJ5 948 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 NEMFO60524 1076 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 KINO60870 393 aaKnown RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 C8AP07357 584 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 SP9P0CG40 484 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 EPXP11678 715 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 TXKP42681 527 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 STARD6P59095 220 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 GPC5P78333 572 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PFKPQ01813 784 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PRKCQQ04759 706 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PRPF4BQ13523 1007 aaKnown RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PSMD5Q16401 504 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 MAPK6Q16659 721 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 FAM187BQ17R55 369 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 EARS2Q5JPH6 523 aaKnown RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 RTP2Q5QGT7 225 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PRSS55Q6UWB4 352 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 BNC2Q6ZN30 1099 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 MAEAQ7L5Y9 396 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 GRASPQ7Z6J2 395 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 NOP9Q86U38 636 aaKnown RBP6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PDZD3Q86UT5 571 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PJA1Q8NG27 643 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 DEPTORQ8TB45 409 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PIGOQ8TEQ8 1089 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 HASPINQ8TF76 798 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 RUBCNQ92622 972 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 RABGGTAQ92696 567 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 NKD1Q969G9 470 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 BORCS6Q96GS4 357 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 TUFT1Q9NNX1 390 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 GJB4Q9NTQ9 266 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 TPCN1Q9ULQ1 816 aa6.46□□□□□ -1.38
CSDE1-207ENST00000483407 PLXNA3P51805 1871 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 MYO10Q9HD67 2058 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 KANSL1LA0AUZ9 987 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 ARHGEF35A5YM69 484 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CCL16O15467 120 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 LAMTOR5O43504 91 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 TRAPPC3O43617 180 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CILPO75339 1184 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 RECQL4O94761 1208 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 B3GAT3O94766 335 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PRKCBP05771 671 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 POU2F2P09086 479 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 LIG1P18858 919 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 MAGEA9P43362 315 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 SNW1Q13573 536 aaKnown RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 MPP2Q14168 576 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 UBXN2BQ14CS0 331 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PPP2R5AQ15172 486 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 MLF2Q15773 248 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 UVSSAQ2YD98 709 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 DCAF4L1Q3SXM0 396 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 AXDND1Q5T1B0 1012 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 CDCA2Q69YH5 1023 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PARM1Q6UWI2 310 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 RSPO2Q6UXX9 243 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 RTL10Q7L3V2 364 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 DGLUCYQ7Z3D6 616 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 APBB1IPQ7Z5R6 666 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 DIS3L2Q8IYB7 885 aaKnown RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 KIAA2013Q8IYS2 634 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 ST13P5Q8NFI4 369 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-207ENST00000483407 ERMNQ8TAM6 284 aa6.45□□□□□ -1.38
CSDE1-207ENST00000483407 LNX1Q8TBB1 728 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms