RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 MAGEA1P43355 309 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 LHX1P48742 406 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 BTG3Q14201 252 aaPredicted RBP8.76□□□□□ -1.01
USP4-210ENST00000483212 SPA17Q15506 151 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 SGO2Q562F6 1265 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 C9orf50Q5SZB4 431 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 CCDC122Q5T0U0 273 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 C10orf76Q5T2E6 689 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
USP4-210ENST00000483212 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
USP4-210ENST00000483212 ACAD10Q6JQN1 1059 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 FUT10Q6P4F1 479 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 FAM171BQ6P995 826 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 KCNT2Q6UVM3 1135 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 TRIM72Q6ZMU5 477 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 PAQR9Q6ZVX9 377 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 TTC30AQ86WT1 665 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 TNS4Q8IZW8 715 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 SLC39A11Q8N1S5 342 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 C12orf29Q8N999 325 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 COLGALT1Q8NBJ5 622 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 DPF3Q92784 378 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 IGSF21Q96ID5 467 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 SLC9A7Q96T83 725 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 ACBD6Q9BR61 282 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 LHX5Q9H2C1 402 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 TRMT1Q9NXH9 659 aaKnown RBP8.76□□□□□ -1.01
USP4-210ENST00000483212 DDX43Q9NXZ2 648 aaKnown RBP8.76□□□□□ -1.01
USP4-210ENST00000483212 CYTH4Q9UIA0 394 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 DSEQ9UL01 958 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 CDH9Q9ULB4 789 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 INTUQ9ULD6 942 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 NCANO14594 1321 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 SF3B1O75533 1304 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP4-210ENST00000483212 VWA8A3KMH1 1905 aa8.76□□□□□ -1.01
USP4-210ENST00000483212 TCRBV5S1A1TA0A578 114 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 ARHGEF37A1IGU5 675 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 MYBPHLA2RUH7 354 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 BTNL10A8MVZ5 291 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 MED7O43513 233 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 RTN2O75298 545 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 TADA2AO75478 443 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 TMEM253P0C7T8 217 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 PTPN1P18031 435 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 LAG3P18627 525 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 MMP8P22894 467 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 MAGEA10P43363 369 aaPredicted RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 GALCP54803 685 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 PSMC1P62191 440 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 TCEAL1Q15170 157 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 GOLGA7BQ2TAP0 167 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 INTS6LQ5JSJ4 861 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 RTP2Q5QGT7 225 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 VARS2Q5ST30 1063 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 NAA35Q5VZE5 725 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 OVOS1Q6IE37 1185 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 MON1BQ7L1V2 547 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 TAS1R1Q7RTX1 841 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 LRRTM3Q86VH5 581 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 PHF13Q86YI8 300 aaPredicted RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 FUKQ8N0W3 1084 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 B3GALNT2Q8NCR0 500 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 C1orf131Q8NDD1 294 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 CLP1Q92989 425 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 ARHGEF26Q96DR7 871 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 TNIP3Q96KP6 325 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 ZNF558Q96NG5 402 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 TMEM209Q96SK2 561 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 YME1L1Q96TA2 773 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 HNRNPABQ99729 332 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 LBHD1Q9BQE6 289 aaPredicted RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 SYT15Q9BQS2 421 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 ZNF518BQ9C0D4 1074 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 THAP2Q9H0W7 228 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 FAM49BQ9NUQ9 324 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 SEPT11Q9NVA2 429 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 TMLHEQ9NVH6 421 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 PUF60Q9UHX1 559 aaKnown RBP8.75□□□□□ -1.01
USP4-210ENST00000483212 TSPAN16Q9UKR8 245 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 SLC4A7Q9Y6M7 1214 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 DUSP10Q9Y6W6 482 aa8.75□□□□□ -1.01
USP4-210ENST00000483212 FAM170AA1A519 330 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 LCHNA4D1U4 455 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 ANKRD62A6NC57 917 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 GOLGA6L9A6NEM1 432 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 TMCO5BA8MYB1 307 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 M0QYV0 167 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 FANCGO15287 622 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 CCP110O43303 1012 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 TRAPPC3O43617 180 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 ARHGEF15O94989 841 aa8.74□□□□□ -1.01
USP4-210ENST00000483212 IPO7O95373 1038 aaKnown RBP8.74□□□□□ -1.01
USP4-210ENST00000483212 FTLP02792 175 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms