RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 DNAI2Q9GZS0 605 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 NIF3L1Q9GZT8 377 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 FAM124BQ9H5Z6 455 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TMLHEQ9NVH6 421 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 GTF3C4Q9UKN8 822 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 ZFP37Q9Y6Q3 630 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 MTCL1Q9Y4B5 1905 aaKnown RBP17.71■□□□□ 0.43
HMGN1-214ENST00000482733 MYBPHLA2RUH7 354 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 C2CD4DB7Z1M9 353 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 ZNF197O14709 1029 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 ASPAP45381 313 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 FMO5P49326 533 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 CDH8P55286 799 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 VEPH1Q14D04 833 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 CYP4A22Q5TCH4 519 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 SCARA5Q6ZMJ2 495 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 UNC93AQ86WB7 457 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 FAM114A1Q8IWE2 563 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 MYCBPAPQ8TBZ2 947 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 SEMA4DQ92854 862 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 MED15Q96RN5 788 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 BCO2Q9BYV7 579 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 THAP9Q9H5L6 903 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 APOBEC3GQ9HC16 384 aaKnown RBP17.71■□□□□ 0.43
HMGN1-214ENST00000482733 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
HMGN1-214ENST00000482733 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-214ENST00000482733 HCRTO43612 131 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 MICAL2O94851 1124 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 RHOP08100 348 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 PTPN1P18031 435 aaKnown RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 MAGEA11P43364 429 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 RAP1GAPP47736 663 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 PSMC1P62191 440 aaKnown RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 RPL10AP62906 217 aaKnown RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 PDZD4Q76G19 769 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 GET4Q7L5D6 327 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 CNOT6LQ96LI5 555 aaKnown RBP17.7■□□□□ 0.42
HMGN1-214ENST00000482733 CORO1BQ9BR76 489 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 SDCBP2Q9H190 292 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 CD320Q9NPF0 282 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 CRTAC1Q9NQ79 661 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 ASAH2Q9NR71 780 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 CEP72Q9P209 647 aa17.7■□□□□ 0.42
HMGN1-214ENST00000482733 ATP2C2O75185 946 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 FGF19O95750 216 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 SP100P23497 879 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-214ENST00000482733 GBP2P32456 591 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-214ENST00000482733 EPHA5P54756 1037 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 NTHL1P78549 312 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 KCNH2Q12809 1159 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 STX1AQ16623 288 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 VSTM1Q6UX27 236 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 RNF135Q8IUD6 432 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 TTC9BQ8N6N2 239 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 B3GALNT2Q8NCR0 500 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 PSMG2Q969U7 264 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 MYLPFQ96A32 169 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 ELMO3Q96BJ8 720 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 CEP295NLQ96MC4 621 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 DNAJC25Q9H1X3 360 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.69■□□□□ 0.422e-9■■■■■ 81.7
HMGN1-214ENST00000482733 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 MRPS23Q9Y3D9 190 aaKnown RBP17.69■□□□□ 0.42
HMGN1-214ENST00000482733 NME7Q9Y5B8 376 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 TCF20Q9UGU0 1960 aaKnown RBP17.69■□□□□ 0.42
HMGN1-214ENST00000482733 TTC28Q96AY4 2481 aa17.69■□□□□ 0.42
HMGN1-214ENST00000482733 C5orf42Q9H799 3197 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 CYP2F1P24903 491 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 NDST1P52848 882 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 CYP27A1Q02318 531 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 TAF12Q16514 161 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 MDH1BQ5I0G3 518 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 DNAJB7Q7Z6W7 309 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-214ENST00000482733 CREBRFQ8IUR6 639 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
HMGN1-214ENST00000482733 PCED1BQ96HM7 432 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 DPEP3Q9H4B8 488 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 CDH7Q9ULB5 785 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 ATP8B3O60423 1300 aa17.68■□□□□ 0.42
HMGN1-214ENST00000482733 LRRN2O75325 713 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 SOAT2O75908 522 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 LAMP2P13473 410 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 PRKCSHP14314 528 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 ATF6P18850 670 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 YWHAEP62258 255 aaKnown RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 PRSS36Q5K4E3 855 aa17.67■□□□□ 0.42
HMGN1-214ENST00000482733 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
HMGN1-214ENST00000482733 IRF2BP1Q8IU81 584 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms