RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
IFT88-206ENST00000482172 TSC2P49815 1807 aa13.27□□□□□ -0.28
IFT88-206ENST00000482172 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 KRT86O43790 486 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 PDGFRBP09619 1106 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 PTPN1P18031 435 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 PPM1AP35813 382 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 NOMO3P69849 1222 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 ORC1Q13415 861 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 MRPL58Q14197 206 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 SPOUT1Q5T280 376 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 FAM117BQ6P1L5 589 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 PHF13Q86YI8 300 aaPredicted RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 RNF168Q8IYW5 571 aaPredicted RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 SLC39A11Q8N1S5 342 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 FIBCD1Q8N539 461 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 CYFIP2Q96F07 1278 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 VCPIP1Q96JH7 1222 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 SYT15Q9BQS2 421 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
IFT88-206ENST00000482172 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 TIMM13Q9Y5L4 95 aaPredicted RBP13.27□□□□□ -0.29
IFT88-206ENST00000482172 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 ANKRD62A6NC57 917 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 USP27XA6NNY8 438 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 H7C4K7 107 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 MICAL2O94851 1124 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 TUBB4AP04350 444 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 CFHP08603 1231 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 MYBL1P10243 752 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 TKTP29401 623 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 ARHGAP25P42331 645 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 GALCP54803 685 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 PLCB3Q01970 1234 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 TCEAL1Q15170 157 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 PKDCCQ504Y2 493 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 PPP1R26Q5T8A7 1209 aaPredicted RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 FAM171A1Q5VUB5 890 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 FAM171BQ6P995 826 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 GPR65Q8IYL9 337 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 C12orf29Q8N999 325 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 CLP1Q92989 425 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 CALR3Q96L12 384 aaKnown RBP13.26□□□□□ -0.29
IFT88-206ENST00000482172 RTP3Q9BQQ7 232 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 CRTAC1Q9NQ79 661 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 TAS2R14Q9NYV8 317 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 SPG21Q9NZD8 308 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 HESX1Q9UBX0 185 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 TSPAN16Q9UKR8 245 aa13.26□□□□□ -0.29
IFT88-206ENST00000482172 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 NT5C1B-RDH14C9J2C7 533 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 M0QYV0 167 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 HCRTO43612 131 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 GPD2P43304 727 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 MAGEA10P43363 369 aaPredicted RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 TSPY1Q01534 308 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 ZNF280DQ6N043 979 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 DENND1BQ6P3S1 775 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 DDX53Q86TM3 631 aaKnown RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 TMEM173Q86WV6 379 aaPredicted RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 MCOLN2Q8IZK6 566 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 WDTC1Q8N5D0 677 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 RNF10Q8N5U6 811 aaKnown RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 ANKRD52Q8NB46 1076 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 STK32AQ8WU08 396 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
IFT88-206ENST00000482172 TMEM169Q96HH4 297 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 NOX5Q96PH1 765 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 PKMYT1Q99640 499 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 TTPALQ9BTX7 342 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 LACRTQ9GZZ8 138 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 PCDHB12Q9Y5F1 795 aa13.25□□□□□ -0.29
IFT88-206ENST00000482172 NCANO14594 1321 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms