RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CHRM3P20309 590 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 MALP21145 153 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 C5AR1P21730 350 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 EDNRBP24530 442 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF135P52742 658 aaPredicted RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 GNAI1P63096 354 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 HOXA4Q00056 320 aaPredicted RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 AMPD3Q01432 767 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 C3orf36Q3SXR2 165 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 KHDC1Q4VXA5 237 aaKnown RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 VPS53Q5VIR6 699 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 CHSY1Q86X52 802 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 DDX42Q86XP3 938 aaKnown RBP eCLIP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 CNGA4Q8IV77 575 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 FAM177A1Q8N128 213 aaPredicted RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 PNLDC1Q8NA58 520 aaKnown RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 C5orf34Q96MH7 638 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 CAMKK2Q96RR4 588 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 VRK1Q99986 396 aaPredicted RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 SIK2Q9H0K1 926 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 GPR35Q9HC97 309 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 SERHLQ9NQF3 203 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 MRPS18AQ9NVS2 196 aaKnown RBP3.3□□□□□ -1.88
KDM1A-204ENST00000481879 MCM8Q9UJA3 840 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 COL4A3BPQ9Y5P4 624 aa3.3□□□□□ -1.88
KDM1A-204ENST00000481879 CCDC154A6NI56 674 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 SMARCA1P28370 1054 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 CCKARP32238 428 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 ARHGAP25P42331 645 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 GCLCP48506 637 aaPredicted RBP3.29□□□□□ -1.88
KDM1A-204ENST00000481879 EVA1CP58658 441 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 SNAPC2Q13487 334 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 FAM50AQ14320 339 aaKnown RBP3.29□□□□□ -1.88
KDM1A-204ENST00000481879 ACAP2Q15057 778 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 MIS18BP1Q6P0N0 1132 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 NAPRTQ6XQN6 538 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 TTC7BQ86TV6 843 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 C8orf58Q8NAV2 365 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 PRSS3P2Q8NHM4 247 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 SPATA3Q8NHX4 192 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 KAT5Q92993 513 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 GPATCH3Q96I76 525 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 ASB2Q96Q27 587 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 EBF3Q9H4W6 596 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 MKS1Q9NXB0 559 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 AGAP1Q9UPQ3 857 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 ATP8A1Q9Y2Q0 1164 aa3.29□□□□□ -1.88
KDM1A-204ENST00000481879 PHLDB1Q86UU1 1377 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 WDR17Q8IZU2 1322 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 KLHL33A6NCF5 533 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 PRSS29PA6NIE9 313 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 NT5C1B-RDH14C9J2C7 533 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 SLC16A3O15427 465 aaKnown RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 TLR5O60602 858 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 KIF20AO95235 890 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 LIPAP38571 399 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 IARSP41252 1262 aaKnown RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 TOB1P50616 345 aaPredicted RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 ZNF134P52741 427 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 CYP4F2P78329 520 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 TCF15Q12870 199 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 TREML2Q5T2D2 321 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 ICE2Q659A1 982 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 SFRP4Q6FHJ7 346 aaPredicted RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 SLC4A10Q6U841 1118 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 NANOGP1Q8N7R0 232 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 PRPF38AQ8NAV1 312 aaKnown RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 NSUN6Q8TEA1 469 aaKnown RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 COA7Q96BR5 231 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 SLAMF7Q9NQ25 335 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 PDGFCQ9NRA1 345 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 DUSP22Q9NRW4 184 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 SH2B3Q9UQQ2 575 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 AFG3L2Q9Y4W6 797 aa3.28□□□□□ -1.88
KDM1A-204ENST00000481879 CFAP20Q9Y6A4 193 aaKnown RBP3.28□□□□□ -1.88
KDM1A-204ENST00000481879 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 ANKRD62A6NC57 917 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 SOCS2O14508 198 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 KATNA1O75449 491 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 BCAR3O75815 825 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 MT-CO1P00395 513 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 IL6RP08887 468 aaPredicted RBP3.27□□□□□ -1.89
KDM1A-204ENST00000481879 RARBP10826 455 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 ENGP17813 658 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 CDK11BP21127 795 aaKnown RBP3.27□□□□□ -1.89
KDM1A-204ENST00000481879 PHKA1P46020 1223 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 PDE1AP54750 535 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 KIF23Q02241 960 aaPredicted RBP3.27□□□□□ -1.89
KDM1A-204ENST00000481879 GTF2H3Q13889 308 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 KIF22Q14807 665 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 LRRC41Q15345 812 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 ABCB5Q2M3G0 1257 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 INAVAQ3KP66 663 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 TMEM108Q6UXF1 575 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 TRIM72Q6ZMU5 477 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 PARS2Q7L3T8 475 aaKnown RBP3.27□□□□□ -1.89
KDM1A-204ENST00000481879 MAVSQ7Z434 540 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 MRPL10Q7Z7H8 261 aaKnown RBP3.27□□□□□ -1.89
KDM1A-204ENST00000481879 USP37Q86T82 979 aa3.27□□□□□ -1.89
KDM1A-204ENST00000481879 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms