RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 PDGFRLQ15198 375 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 IL17AQ16552 155 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 KYAT1Q16773 422 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 PMS2CLQ68D20 193 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 SPPL2BQ8TCT7 592 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
RXRB-203ENST00000481441 KCNN1Q92952 543 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 RPF1Q9H9Y2 349 aaKnown RBP18.77■□□□□ 0.6
RXRB-203ENST00000481441 TMEM9BQ9NQ34 198 aa18.77■□□□□ 0.6
RXRB-203ENST00000481441 ANO9A1A5B4 782 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 KHNYNO15037 678 aaKnown RBP18.76■□□□□ 0.59
RXRB-203ENST00000481441 OGTO15294 1046 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 GBP1P32455 592 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 TOB1P50616 345 aaPredicted RBP18.76■□□□□ 0.59
RXRB-203ENST00000481441 SMARCB1Q12824 385 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 ZNF268Q14587 947 aaPredicted RBP18.76■□□□□ 0.59
RXRB-203ENST00000481441 TXNDC8Q6A555 127 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 JADE1Q6IE81 842 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 CC2D1AQ6P1N0 951 aaPredicted RBP18.76■□□□□ 0.59
RXRB-203ENST00000481441 MON1AQ86VX9 555 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 FBXO18Q8NFZ0 1043 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 ACDQ96AP0 544 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 BICD1Q96G01 975 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 NOL7Q9UMY1 257 aaKnown RBP18.76■□□□□ 0.59
RXRB-203ENST00000481441 INVSQ9Y283 1065 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 PTPRDP23468 1912 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 AKAP13Q12802 2813 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 PCNX2A6NKB5 2137 aa18.76■□□□□ 0.59
RXRB-203ENST00000481441 PATE3B3GLJ2 98 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 DGKEP52429 567 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 NCKAP1LP55160 1127 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 CPA6Q8N4T0 437 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 CD101Q93033 1021 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 EXOC4Q96A65 974 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 ECT2Q9H8V3 914 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 DSEQ9UL01 958 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
RXRB-203ENST00000481441 NFICP08651 508 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 LIG4P49917 911 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 C11orf74Q86VG3 221 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 CD302Q8IX05 232 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 SYT2Q8N9I0 419 aaPredicted RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 ABI2Q9NYB9 513 aaPredicted RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 TNRC6BQ9UPQ9 1833 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 ANKRD11Q6UB99 2663 aaPredicted RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 A0A0B4J269 797 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 H0YCG3 227 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 CYB561D2O14569 222 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 PIGRP01833 764 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 PRPHP41219 470 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 NEK4P51957 841 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 IRX4P78413 519 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 MTF1Q14872 753 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 USP39Q53GS9 565 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 HYIQ5T013 277 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 WSCD1Q658N2 575 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 RASSF3Q86WH2 238 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 METTL23Q86XA0 190 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 THEM5Q8N1Q8 247 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 TSTD1Q8NFU3 115 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 ZCCHC14Q8WYQ9 949 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 MRPS31Q92665 395 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 PNMA5Q96PV4 448 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 PYM1Q9BRP8 204 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 TPSD1Q9BZJ3 242 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 LARSQ9P2J5 1176 aaKnown RBP18.74■□□□□ 0.59
RXRB-203ENST00000481441 DERAQ9Y315 318 aa18.74■□□□□ 0.59
RXRB-203ENST00000481441 CACNA1EQ15878 2313 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 ANAPC1Q9H1A4 1944 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 PI4KAP42356 2102 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 NPHP3-ACAD11A0A0J9YXS1 232 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 LAD1O00515 517 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 TADA3O75528 432 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 BCKDHBP21953 392 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 GPR15P49685 360 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 SLC12A3P55017 1021 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 FAM160A1Q05DH4 1040 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 PSMD2Q13200 908 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 TMEM132DQ14C87 1099 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 ZNF77Q15935 545 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 CYP2U1Q7Z449 544 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 STKLD1Q8NE28 680 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 DEFB124Q8NES8 71 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 TMLHEQ9NVH6 421 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 DUS2Q9NX74 493 aaKnown RBP18.73■□□□□ 0.59
RXRB-203ENST00000481441 KCND2Q9NZV8 630 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 WNT6Q9Y6F9 365 aa18.73■□□□□ 0.59
RXRB-203ENST00000481441 TAF6P49848 677 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 RING1Q06587 406 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 ZRSR1Q15695 479 aaKnown RBP18.72■□□□□ 0.59
RXRB-203ENST00000481441 EML3Q32P44 896 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 ARSHQ5FYA8 562 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 SLC39A4Q6P5W5 647 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms