RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
ABCF3-215ENST00000481116 C2orf15Q8WU43 125 aaKnown RBP13.79□□□□□ -0.2
ABCF3-215ENST00000481116 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 ASB16Q96NS5 453 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 XYLT2Q9H1B5 865 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 SLITRK6Q9H5Y7 841 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 HSFX1Q9UBD0 423 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
ABCF3-215ENST00000481116 WNT16Q9UBV4 365 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 FRMD4BQ9Y2L6 1034 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 NCANO14594 1321 aa13.79□□□□□ -0.2
ABCF3-215ENST00000481116 ECI2O75521 394 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 AKAP3O75969 853 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 MICAL2O94851 1124 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 CLSTN1O94985 981 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 KIF20AO95235 890 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
ABCF3-215ENST00000481116 PCSK1P29120 753 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 PRCPP42785 496 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 RAP1GAPP47736 663 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 CDH8P55286 799 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 TNNC1P63316 161 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 CLDN10P78369 228 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 VEPH1Q14D04 833 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
ABCF3-215ENST00000481116 SCARA5Q6ZMJ2 495 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 LEMD2Q8NC56 503 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
ABCF3-215ENST00000481116 TMEM174Q8WUU8 243 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 MKNK1Q9BUB5 465 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.2
ABCF3-215ENST00000481116 SLC2A4RGQ9NR83 387 aa13.78□□□□□ -0.2
ABCF3-215ENST00000481116 MAGED2Q9UNF1 606 aaPredicted RBP13.78□□□□□ -0.2
ABCF3-215ENST00000481116 TRIM49P0CI25 452 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 TRIM49CP0CI26 452 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 GNL1P36915 607 aaPredicted RBP13.77□□□□□ -0.21
ABCF3-215ENST00000481116 HELZP42694 1942 aaKnown RBP13.77□□□□□ -0.21
ABCF3-215ENST00000481116 VAMP7P51809 220 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 ADAM9Q13443 819 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 NCOA4Q13772 614 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 TAF12Q16514 161 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 NFE2Q16621 373 aaPredicted RBP13.77□□□□□ -0.21
ABCF3-215ENST00000481116 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 GPR158Q5T848 1215 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 FAM171BQ6P995 826 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 VITQ6UXI7 678 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SPATA2LQ8IUW3 424 aaPredicted RBP13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SCN4BQ8IWT1 228 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SPATA18Q8TC71 538 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SMARCD2Q92925 531 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SMARCE1Q969G3 411 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 RSPRY1Q96DX4 576 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 FAM122AQ96E09 287 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 CCDC34Q96HJ3 373 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 SNX25Q9H3E2 840 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 ZFP14Q9HCL3 533 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
ABCF3-215ENST00000481116 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
ABCF3-215ENST00000481116 TACC1O75410 805 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 STAU1O95793 577 aaKnown RBP13.76□□□□□ -0.21
ABCF3-215ENST00000481116 HMGA1P17096 107 aaKnown RBP13.76□□□□□ -0.21
ABCF3-215ENST00000481116 BDNFP23560 247 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 ATICP31939 592 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 PLA2G5P39877 138 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
ABCF3-215ENST00000481116 CYP27A1Q02318 531 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 TCF15Q12870 199 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 NFIL3Q16649 462 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 ZACNQ401N2 412 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SLC44A4Q53GD3 710 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 ZNF658Q5TYW1 1059 aaPredicted RBP13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SPOPLQ6IQ16 392 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 TMEM150AQ86TG1 271 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 FAM186BQ8IYM0 893 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SPATA20Q8TB22 786 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SYAP1Q96A49 352 aaPredicted RBP13.76□□□□□ -0.21
ABCF3-215ENST00000481116 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 GSDMAQ96QA5 445 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 SDCBP2Q9H190 292 aa13.76□□□□□ -0.21
ABCF3-215ENST00000481116 RMND1Q9NWS8 449 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms