RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 SCLT1Q96NL6 688 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 CEP89Q96ST8 783 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 NAP1L4Q99733 375 aaKnown RBP7.22□□□□□ -1.25
LRCH3-216ENST00000481048 TCF25Q9BQ70 676 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 UNC45AQ9H3U1 944 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 ENTPD7Q9NQZ7 604 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 RNF19AQ9NV58 838 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 VPS54Q9P1Q0 977 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 BARX2Q9UMQ3 279 aaPredicted RBP7.22□□□□□ -1.25
LRCH3-216ENST00000481048 TLR6Q9Y2C9 796 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 NR2E1Q9Y466 385 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 IRAK3Q9Y616 596 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
LRCH3-216ENST00000481048 DOCK8Q8NF50 2099 aa7.21□□□□□ -1.25
LRCH3-216ENST00000481048 TMEM221A6NGB7 291 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 M0R296 226 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 ADAMTS3O15072 1205 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 TBX3O15119 743 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 ASAP2O43150 1006 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 LRRN2O75325 713 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 MAFO75444 373 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 STBD1O95210 358 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 GCFC2P16383 781 aaKnown RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 PLCG1P19174 1290 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 TECP42680 631 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 RAB27AP51159 221 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 POLGP54098 1239 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 DLG4P78352 724 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 PPP2R5CQ13362 524 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 TOB2Q14106 344 aaPredicted RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 SMC1AQ14683 1233 aaKnown RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 NONOQ15233 471 aaKnown RBP eCLIP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 PCBP1Q15365 356 aaKnown RBP eCLIP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 CLLU1OSQ5K130 101 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 MEI1Q5TIA1 1274 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 PLPP4Q5VZY2 271 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 CES5AQ6NT32 575 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 SYCE2Q6PIF2 218 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 SRGAP1Q7Z6B7 1085 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 SUGP1Q8IWZ8 645 aaKnown RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 SLC39A11Q8N1S5 342 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 VN1R2Q8NFZ6 395 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 ETNPPLQ8TBG4 499 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 PGBD4Q96DM1 585 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 TMEM169Q96HH4 297 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 RPGRIP1Q96KN7 1286 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 ADAM7Q9H2U9 754 aa7.21□□□□□ -1.26
LRCH3-216ENST00000481048 DDX25Q9UHL0 483 aaKnown RBP7.21□□□□□ -1.26
LRCH3-216ENST00000481048 TRIP11Q15643 1979 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 KMT2EQ8IZD2 1858 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 A0A087WZ62 844 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 MYOCOSA0A1B0GUC4 107 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 C2orf71A6NGG8 1288 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 HIDE1A8MVS5 230 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 CHMP2AO43633 222 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 CDKL5O76039 1030 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 CSPG5O95196 566 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 MTHFRP42898 656 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 QARSP47897 775 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 MRE11P49959 708 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 YARSP54577 528 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 BCAR1P56945 870 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 NR0B2Q15466 257 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 UGCGQ16739 394 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 PTPN21Q16825 1174 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 MTERF2Q49AM1 385 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 TWF2Q6IBS0 349 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 GLB1LQ6UWU2 654 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 OTUD6AQ7L8S5 288 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 DDX53Q86TM3 631 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 PPFIBP1Q86W92 1011 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 C4orf19Q8IY42 314 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 UBALD2Q8IYN6 164 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 TCP11Q8WWU5 503 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 INTS4Q96HW7 963 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 RIPOR3Q96MK2 946 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 FDXACB1Q9BRP7 624 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 UBN1Q9NPG3 1134 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 CYP26B1Q9NR63 512 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 SUCLA2Q9P2R7 463 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-216ENST00000481048 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 C2orf16Q68DN1 1984 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 DOCK6Q96HP0 2047 aa7.2□□□□□ -1.26
LRCH3-216ENST00000481048 CLASP2O75122 1294 aaKnown RBP7.19□□□□□ -1.26
LRCH3-216ENST00000481048 OFD1O75665 1012 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
LRCH3-216ENST00000481048 TDP2O95551 362 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 CXCL14O95715 111 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 C1RP00736 705 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 ALDH2P05091 517 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 GALTP07902 379 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 CTSAP10619 480 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 HOXA5P20719 270 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 AXLP30530 894 aa7.19□□□□□ -1.26
LRCH3-216ENST00000481048 RNASELQ05823 741 aaKnown RBP7.19□□□□□ -1.26
LRCH3-216ENST00000481048 POU5F1BQ06416 359 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms