RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ITGB8P26012 769 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 OR1G1P47890 313 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 PPIGQ13427 754 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 DENND1BQ6P3S1 775 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 ERICH1Q86X53 443 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 B3GALNT2Q8NCR0 500 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 C1orf131Q8NDD1 294 aaKnown RBP15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 TPCN2Q8NHX9 752 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 TOP1MTQ969P6 601 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 DDX43Q9NXZ2 648 aaKnown RBP15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 CTTNBP2NLQ9P2B4 639 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 CNOT8Q9UFF9 292 aaKnown RBP15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 CDH9Q9ULB4 789 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 STRIP2Q9ULQ0 834 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 JRKLQ9Y4A0 524 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 SCINQ9Y6U3 715 aa15.69■□□□□ 0.1
SNRNP200-205ENST00000480835 B4GALT3O60512 393 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 DGKIO75912 1065 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 ALDH2P05091 517 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 PTPN1P18031 435 aaKnown RBP15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 LMO2P25791 158 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 BRCC3P46736 316 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 SNX16P57768 344 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 PTP4A2Q12974 167 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 GOLGA7BQ2TAP0 167 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 PPP1R26Q5T8A7 1209 aaPredicted RBP15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 THEM5Q8N1Q8 247 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 WDTC1Q8N5D0 677 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 RABGGTAQ92696 567 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 C11orf70Q9BRQ4 267 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 DPEP3Q9H4B8 488 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 MRPL47Q9HD33 250 aaKnown RBP15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 WDR35Q9P2L0 1181 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 LCMT1Q9UIC8 334 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 TSPAN16Q9UKR8 245 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 FAN1Q9Y2M0 1017 aa15.68■□□□□ 0.1
SNRNP200-205ENST00000480835 GRID2IPA4D2P6 1211 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 NRP1O14786 923 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 SYN3O14994 580 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 PALMO75781 387 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 IGFBP6P24592 240 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 GPD2P43304 727 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 GATMP50440 423 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 BCAT1P54687 386 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 ELAVL2Q12926 359 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 PKDCCQ504Y2 493 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 PLEKHA7Q6IQ23 1121 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 MMS22LQ6ZRQ5 1243 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 SLFN11Q7Z7L1 901 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 C12orf29Q8N999 325 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 ANKRD52Q8NB46 1076 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 IPO4Q8TEX9 1081 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 STK32AQ8WU08 396 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 HNRNPABQ99729 332 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 SYT15Q9BQS2 421 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 ACBD6Q9BR61 282 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 NUP85Q9BW27 656 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 DNAJB4Q9UDY4 337 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 ADAM28Q9UKQ2 775 aa15.67■□□□□ 0.1
SNRNP200-205ENST00000480835 TADA2AO75478 443 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 URI1O94763 535 aaPredicted RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 UPP2O95045 317 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 ITGB1P05556 798 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 RRM1P23921 792 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 GABRB2P47870 512 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 TAP1Q03518 808 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 BST2Q10589 180 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 MAPRE1Q15691 268 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 PAN2Q504Q3 1202 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 OVOS1Q6IE37 1185 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 C11orf63Q6NUN7 778 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 LRRC57Q8N9N7 239 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 ZNF564Q8TBZ8 553 aaPredicted RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 HASPINQ8TF76 798 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 C18orf8Q96DM3 657 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 HTATIP2Q9BUP3 242 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 OSGEPQ9NPF4 335 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 CYLDQ9NQC7 956 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 PRG3Q9Y2Y8 225 aaPredicted RBP15.66■□□□□ 0.1
SNRNP200-205ENST00000480835 I3L4J1 428 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 FANCGO15287 622 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 HCRTO43612 131 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 GALTP07902 379 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 PRLRP16471 622 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 SLC11A1P49279 550 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 SLC8A3P57103 927 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 PLCB3Q01970 1234 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 YWHAHQ04917 246 aaPredicted RBP15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 FPGSQ05932 587 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 PDCLQ13371 301 aa15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 ZNF268Q14587 947 aaPredicted RBP15.65■□□□□ 0.1
SNRNP200-205ENST00000480835 PTPN20Q4JDL3 420 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms