RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CRLS1Q9UJA2 301 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PCDHB2Q9Y5E7 798 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ADGRA2Q96PE1 1338 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 AIM2O14862 343 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 NCK2O43639 380 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 EGFRP00533 1210 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 UBE3AQ05086 875 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 WDR72Q3MJ13 1102 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ANKRD7Q92527 254 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TRIM9Q9C026 710 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TXNP10599 105 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ALOX15P16050 662 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 MDH1P40925 334 aaKnown RBP9.93□□□□□ -0.82
VEGFA-212ENST00000480614 KIZQ2M2Z5 673 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 ANKS6Q68DC2 871 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TBC1D10CQ8IV04 446 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 MAFGO15525 162 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 EMC2Q15006 297 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CCT8L2Q96SF2 557 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 WWOXQ9NZC7 414 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 CTNNAL1Q9UBT7 734 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 SLC25A13Q9UJS0 675 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 TMCC3Q9ULS5 477 aa9.93□□□□□ -0.82
VEGFA-212ENST00000480614 PTPRZ1P23471 2315 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 USP1O94782 785 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SPP2Q13103 211 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CCDC144BQ3MJ40 725 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 RASGRP2Q7LDG7 609 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ABCC3O15438 1527 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ATP1A1P05023 1023 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 NAB2Q15742 525 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CD302Q8IX05 232 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 RMND5AQ9H871 391 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 E7ENQ6 273 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ZW10O43264 779 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CYP2D6P10635 497 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 PDGFRAP16234 1089 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CDH18Q13634 790 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 NLRP9Q7RTR0 991 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 DNAJC7Q99615 494 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TMEM106CQ9BVX2 250 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ERAP1Q9NZ08 941 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 NDUFA13Q9P0J0 144 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 AMACRQ9UHK6 382 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 MRPS25P82663 173 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 COG2Q14746 738 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ANGPT1Q15389 498 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 GLB1LQ6UWU2 654 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 C16orf62Q7Z3J2 963 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 PPIL6Q8IXY8 311 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 VPS26AO75436 327 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ILKAPQ9H0C8 392 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TRMT6Q9UJA5 497 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 F5H423 210 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ITGA4P13612 1032 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 GTF2H1P32780 548 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ARMCX4Q5H9R4 360 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 RFWD2Q8NHY2 731 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ZNF507Q8TCN5 953 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ECSITQ9BQ95 431 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 DRG1Q9Y295 367 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CYP26A1O43174 497 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 GRK3P35626 688 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CPT1AP50416 773 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 DSG1Q02413 1049 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 BOLA3Q53S33 107 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CCDC60Q8IWA6 550 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SUGP1Q8IWZ8 645 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 PGBD3Q8N328 593 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TFB1MQ8WVM0 346 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 EXTL3O43909 919 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 EMILIN2Q9BXX0 1053 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ESYT3A0FGR9 886 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 C2orf81A6NN90 581 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 RNF103O00237 685 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CENPAP49450 140 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TRIM16LQ309B1 348 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 ERP27Q96DN0 273 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 AAR2Q9Y312 384 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 DARSP14868 501 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 PEX5P50542 639 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 GSPT2Q8IYD1 628 aaKnown RBP9.92□□□□□ -0.82
VEGFA-212ENST00000480614 SERPINB12Q96P63 405 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 FAM167BQ9BTA0 163 aa9.92□□□□□ -0.82
VEGFA-212ENST00000480614 TTC33Q6PID6 262 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 ATP6V0D2Q8N8Y2 350 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 TNS3Q68CZ2 1445 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CCT8L1PA6NM43 557 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 VWA5AO00534 786 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 RNASEH1O60930 286 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms